FastQCFastQC Report
Wed 13 Sep 2023
stdin:ERR2764863

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR2764863
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2421685
Total Bases607.8 Mbp
Sequences flagged as poor quality0
Sequence length90-284
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCACACGTCTGAACTCCAGTCACAGCGATAGATCTCGTATGCCGTCTTC28240.11661301944720308TruSeq Adapter, Index 1 (96% over 27bp)

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)