FastQCFastQC Report
Tue 12 Sep 2023
stdin:ERR2764878

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR2764878
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3067993
Total Bases776.5 Mbp
Sequences flagged as poor quality0
Sequence length90-288
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAGCACACGTCTGAACTCCAGTCACTCCGGAGAATCTCGTATGCCGTCT35390.11535228405019178TruSeq Adapter, Index 6 (96% over 29bp)

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)