FastQCFastQC Report
Wed 13 Sep 2023
stdin:ERR2764956

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR2764956
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3456817
Total Bases885.2 Mbp
Sequences flagged as poor quality0
Sequence length90-293
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGAGCACACGTCTGAACTCCAGTCACTAATGCGCATCTCGTATGCCG352731.0203895664711207TruSeq Adapter, Index 3 (96% over 32bp)

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)