FastQCFastQC Report
Wed 13 Sep 2023
stdin:ERR2764993

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR2764993
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1565460
Total Bases358.1 Mbp
Sequences flagged as poor quality0
Sequence length90-289
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGAGCACACGTCTGAACTCCAGTCACTCCGCGAAATCTCGTATGCCG16550.10571972455380527TruSeq Adapter, Index 6 (96% over 32bp)

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)