FastQCFastQC Report
Wed 13 Sep 2023
stdin:ERR3517347

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR3517347
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1299004
Total Bases391.6 Mbp
Sequences flagged as poor quality0
Sequence length282-302
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATTACTCGATCTCGTAT31540.24280140784785884TruSeq Adapter, Index 27 (97% over 39bp)

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)