FastQCFastQC Report
Wed 13 Sep 2023
stdin:SRR6456167

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR6456167
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences659172
Total Bases197.7 Mbp
Sequences flagged as poor quality0
Sequence length300
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCGCCCTCGCCCTCGCCGGGATGTCCCCATAGGGTGGCCTGAGGGAATC7940.12045414550375319No Hit
TAGCCCACGCCCACACACGCTGTCAAGCCCACAGGAATGGCCCTGAATGG6680.10133925591499639No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)