FastQCFastQC Report
Wed 13 Sep 2023
stdin:SRR7516723

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR7516723
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17911262
Total Bases5.3 Gbp
Sequences flagged as poor quality0
Sequence length300
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACTAGGCATGATCTCGTATGCCGT492030.2747042614864324No Hit
ATACACATCTCCGAGCCCACGAGACTAGGCATGATCTCGTATGCCGTCTT257620.1438312945229655TruSeq Adapter, Index 1 (95% over 21bp)

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)