FastQCFastQC Report
Wed 13 Sep 2023
stdin:SRR20982525

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR20982525
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences44897
Total Bases27 Mbp
Sequences flagged as poor quality0
Sequence length602
%GC52

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTACCTACTCCTACGGGAGGCAGCAGTAGGGAATCTTCCGCAATGGGCGA4147992.38701917722788No Hit
GTACCTACTCCTACGGGAGGCAGCAGTAGGGAATCTTCCACAATGGGCGA14873.312025302358732No Hit
GTACCTACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGA3380.7528342650956634No Hit
GTACCTACTCCTACGGGAGGCAGCAGTAGGGAATCTTCCGCAATGGACGC1050.23386863264806113No Hit
GTACCTACTCCTACGGGAGGCAGCAGTAGGGAATCTTCCACAATGGACGC910.2026861482949863No Hit
GTACCTACTCCTACGGGAGGCAGCAGTAGGGAATCTTCGGCAATGGGGGC870.19377686705125066No Hit
GTACCTACTCCTACGGGAGGCAGCAGTAGGGAATCTTCTGCAATGGGCGA460.10245673430296011No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)