FastQCFastQC Report
Wed 13 Sep 2023
stdin:SRR23525249

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR23525249
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3104160
Total Bases937.4 Mbp
Sequences flagged as poor quality0
Sequence length302
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACGTATTCCACCATCTCGTATGCC82340.2652569455182723No Hit
CTTATACACATCTCCGAGCCCACGAGACGTATTCCACCATCGCGTATGCC74700.24064481212308647No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)