Index of /~ckern/FAANG_Project

[ICO]NameLast modifiedSizeDescription

[PARENTDIR]Parent Directory  -  
[DIR]Bovine_Cell_Lines/2019-03-27 09:25 -  
[DIR]CTCF_Motifs/2017-10-24 14:29 -  
[   ]Cattle_LncRNA.bed2016-08-31 14:41 346K 
[   ]Cattle_LncRNA_Hg38.bed2016-09-01 10:40 284K 
[   ]Cattle_LncRNA_UCSC.bed2016-08-31 14:58 301K 
[DIR]Cattle_NCBI/2019-03-27 09:21 -  
[TXT]Cattle_NCBI_To_UCSC.txt2016-08-31 14:54 530  
[TXT]Cattle_NONCODE.tsv2018-08-13 20:18 12K 
[DIR]Chicken_2017/2018-04-25 11:04 -  
[DIR]Chicken_DNase_Pool_Reps/2016-10-25 13:38 -  
[DIR]Chicken_Ensembl/2019-03-27 09:26 -  
[DIR]Chicken_Ensembl_MoreMarks/2017-10-20 16:59 -  
[DIR]Chicken_Liver_ChromHMM/2017-04-30 17:04 -  
[   ]Chicken_LncRNA.bed2016-08-31 14:41 446K 
[   ]Chicken_LncRNA_Hg38.bed2016-09-01 10:41 95K 
[   ]Chicken_LncRNA_UCSC.bed2016-08-31 14:59 384K 
[DIR]Chicken_NCBI/2019-03-27 09:27 -  
[TXT]Chicken_NCBI_To_UCSC.txt2016-08-31 14:49 634  
[TXT]Chicken_NONCODE.tsv2018-08-13 20:16 22K 
[DIR]Chicken_Redo/2019-03-27 09:27 -  
[DIR]Coding_Genes/2016-09-02 14:23 -  
[DIR]Combined_LncRNA_NCBI/2016-08-16 10:08 -  
[TXT]Common_LncRNA.txt2016-09-01 10:45 179K 
[TXT]Common_LncRNA_.txt2016-09-01 10:46 63K 
[TXT]Compare_FEELnc.py2018-04-11 10:17 468  
[DIR]Conserved_Peaks/2017-07-13 13:26 -  
[DIR]ENCODE_Human_CellLines/2019-03-27 09:28 -  
[DIR]ENCODE_Mouse_Tissues/2019-03-27 09:28 -  
[TXT]FEELnc_Scores_Analysis.py2018-08-13 16:27 688  
[   ]GCF_000001635.25_GRCm38.p5_genomic.gff2017-02-03 14:29 605M 
[TXT]Get_Class_Codes.py2018-08-13 16:38 367  
[DIR]Human_Fat/2017-01-27 10:59 -  
[DIR]Input_Peaks_Test/2017-10-10 12:50 -  
[DIR]Input_Test/2019-03-27 09:28 -  
[DIR]Mouse_DNase/2016-10-21 10:12 -  
[   ]NONCODEv5_pig.fa.gz2017-08-24 06:50 8.5M 
[DIR]Orthologs/2018-08-14 12:19 -  
[DIR]Pig/2017-10-20 17:00 -  
[DIR]Pig_2017/2019-03-27 09:22 -  
[DIR]Pig_Ensembl/2019-03-27 09:29 -  
[DIR]Pig_Ensembl_MoreMarks/2017-10-20 17:00 -  
[   ]Pig_LncRNA.bed2016-08-31 14:40 696K 
[   ]Pig_LncRNA_Hg38.bed2016-09-01 10:41 370K 
[   ]Pig_LncRNA_UCSC.bed2016-08-31 14:59 603K 
[DIR]Pig_NCBI/2019-03-27 09:29 -  
[TXT]Pig_NCBI_To_UCSC.txt2016-08-31 14:52 364  
[TXT]Pig_NONCODE.tsv2018-08-13 20:18 164K 
[DIR]Pipeline_Test/2017-02-15 11:19 -  
[DIR]Raw_Reads/2016-09-12 10:10 -  
[   ]Rplots.pdf2016-09-01 11:44 4.9K 
[DIR]Snakemake_Test/2019-03-27 09:30 -  
[DIR]Subsample_Test/2019-03-27 09:30 -  
[DIR]Tissue_Specific_LncRNA/2017-11-12 15:03 -  
[   ]bosTau8ToHg38.over.chain.gz2014-10-17 08:30 80M 
[   ]chick_cow.bed2016-08-31 14:26 459K 
[TXT]convert_lncRNA_to_entrez.py2017-11-01 10:56 247  
[TXT]entrez2gene.py2017-11-02 14:03 483  
[TXT]filter_noncode_hits.py2018-08-13 20:03 210  
[   ]galGal5ToHg38.over.chain.gz2016-04-20 10:55 10M 
[TXT]genecounts.txt2018-04-23 21:43 3.6K 
[   ]hg38.bosTau8.all.chain.gz2014-10-16 18:18 500M 
[   ]hg38.galGal5.all.chain.gz2016-04-19 16:46 73M 
[   ]hglft_genome_24c7_746440.bed2016-08-31 14:18 3.7M 
[TXT]isocounts.txt2018-04-24 01:19 3.8K 
[TXT]job.sh2018-08-13 19:25 80  
[TXT]lncrna_table.txt2016-09-01 11:52 388K 
[TXT]make_expression_table.py2016-09-01 11:52 1.4K 
[IMG]pearson.png2017-04-30 15:56 115K 
[TXT]plotcor.sh2017-04-30 15:50 1.0K 
[   ]readCounts.npz2017-04-30 15:56 1.8M 
[   ]ref_GRCh38.p7_top_level.gff32017-02-03 14:27 963M 
[TXT]rename_chromosomes.py2018-04-20 16:02 422  
[   ]slurm-11508761.out2017-04-30 15:48 3.7K 
[   ]slurm-11508764.out2017-04-30 15:56 1.6K 
[   ]slurm-19039243.out2018-04-23 21:43 810  
[   ]slurm-19044876.out2018-04-24 01:19 810  
[IMG]spearman.png2017-04-30 15:56 114K 
[   ]susScr3ToHg38.over.chain.gz2015-04-29 13:44 85M 
[   ]temp2017-11-30 12:50 2.6M 
[TXT]temp.sh2018-04-23 23:56 91  

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