Information for 1-CCACYAGGKGGC (Motif 1)

G T A C A G T C C T G A T A G C G A C T C G T A A C T G C T A G C A G T C T A G A C T G G T A C
Reverse Opposite:
C A T G T G A C A G T C G T C A A G T C A G T C G C A T C T G A A T C G G A C T A C T G C A T G
p-value:1e-2900
log p-value:-6.678e+03
Information Content per bp:1.638
Number of Target Sequences with motif3549.0
Percentage of Target Sequences with motif53.68%
Number of Background Sequences with motif1843.8
Percentage of Background Sequences with motif4.38%
Average Position of motif in Targets100.8 +/- 29.2bp
Average Position of motif in Background102.4 +/- 58.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.90
Offset:-1
Orientation:reverse strand
Alignment:-CCACYAGGKGGC-------
GCCASCAGGGGGCGCYVNNG
 A C G T G T A C A G T C C T G A T A G C G A C T C G T A A C T G C T A G C A G T C T A G A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.89
Offset:-3
Orientation:forward strand
Alignment:---CCACYAGGKGGC----
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T G T A C A G T C C T G A T A G C G A C T C G T A A C T G C T A G C A G T C T A G A C T G G T A C A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.89
Offset:-3
Orientation:reverse strand
Alignment:---CCACYAGGKGGC-----
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T G T A C A G T C C T G A T A G C G A C T C G T A A C T G C T A G C A G T C T A G A C T G G T A C A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

CTCF/MA0531.1/Jaspar

Match Rank:4
Score:0.76
Offset:0
Orientation:forward strand
Alignment:CCACYAGGKGGC---
CCGCTAGATGGCGCC
 G T A C A G T C C T G A T A G C G A C T C G T A A C T G C T A G C A G T C T A G A C T G G T A C A C G T A C G T A C G T
A T G C G T A C T C A G T G A C G A C T C T G A C T A G C T G A A C G T A C T G C A T G G A T C C A T G G A T C G A T C

ZIC4/MA0751.1/Jaspar

Match Rank:5
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CCACYAGGKGGC-
NCNCAGCGGGGGGTC
 A C G T A C G T G T A C A G T C C T G A T A G C G A C T C G T A A C T G C T A G C A G T C T A G A C T G G T A C A C G T
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CCACYAGGKGGC-
DCHCAGCAGGRGGCC
 A C G T A C G T G T A C A G T C C T G A T A G C G A C T C G T A A C T G C T A G C A G T C T A G A C T G G T A C A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CCACYAGGKGGC
CACAGCAGGGGG-
 A C G T G T A C A G T C C T G A T A G C G A C T C G T A A C T G C T A G C A G T C T A G A C T G G T A C
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CCACYAGGKGGC
--AACAGATGGC
 G T A C A G T C C T G A T A G C G A C T C G T A A C T G C T A G C A G T C T A G A C T G G T A C
A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C

opa/dmmpmm(Noyes)/fly

Match Rank:9
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CCACYAGGKGGC-
-CAGCGGGGGGTC
 G T A C A G T C C T G A T A G C G A C T C G T A A C T G C T A G C A G T C T A G A C T G G T A C A C G T
A C G T A G T C G T C A T C A G G A T C C T A G A C T G A C T G A C T G C T A G A T C G A C G T T G A C

ZIC1/MA0696.1/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CCACYAGGKGGC-
CACAGCGGGGGGTC
 A C G T G T A C A G T C C T G A T A G C G A C T C G T A A C T G C T A G C A G T C T A G A C T G G T A C A C G T
T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C