Information for 17-CGTHCAAK (Motif 10)

A G T C A C T G A G C T G C T A A G T C C G T A C G T A C A T G
Reverse Opposite:
G T A C A C G T C G A T A C T G C G A T T C G A A G T C A C T G
p-value:1e-34
log p-value:-8.018e+01
Information Content per bp:1.770
Number of Target Sequences with motif1178.0
Percentage of Target Sequences with motif17.82%
Number of Background Sequences with motif5259.3
Percentage of Background Sequences with motif12.50%
Average Position of motif in Targets97.6 +/- 58.5bp
Average Position of motif in Background100.4 +/- 64.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZAP1(WRKY(Zn))/Arabidopsis thaliana/AthaMap

Match Rank:1
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--CGTHCAAK
CTCGGTCAA-
 A C G T A C G T A G T C A C T G A G C T G C T A A G T C C G T A C G T A C A T G
T A G C A C G T T A G C C T A G A C T G A C G T A G T C C G T A C G T A A C G T

ZAP1/MA0589.1/Jaspar

Match Rank:2
Score:0.74
Offset:-4
Orientation:reverse strand
Alignment:----CGTHCAAK
GGCTCGGTCAA-
 A C G T A C G T A C G T A C G T A G T C A C T G A G C T G C T A A G T C C G T A C G T A C A T G
C T A G T C A G T A G C A C G T T A G C A C T G A C T G A C G T A G T C C G T A C G T A A C G T

SPL3(SBP)/colamp-SPL3-DAP-Seq(GSE60143)/Homer

Match Rank:3
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---CGTHCAAK-
DTCCGTACAAHW
 A C G T A C G T A C G T A G T C A C T G A G C T G C T A A G T C C G T A C G T A C A T G A C G T
C A T G A C G T A G T C A G T C A C T G A C G T C G T A A G T C T C G A T C G A G C T A G C T A

SPL5(SBP)/colamp-SPL5-DAP-Seq(GSE60143)/Homer

Match Rank:4
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----CGTHCAAK
NNDCCGTACDNN
 A C G T A C G T A C G T A C G T A G T C A C T G A G C T G C T A A G T C C G T A C G T A C A T G
C G A T C A T G C G A T G A T C G T A C A C T G A C G T C G T A A G T C C T G A C G T A G C A T

WRKY63/MA1092.1/Jaspar

Match Rank:5
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CGTHCAAK
CGGTCAAC
 A G T C A C T G A G C T G C T A A G T C C G T A C G T A C A T G
G A T C C T A G A C T G A C G T A G T C C G T A C G T A A T G C

Pr_0249(RRM)/Phytophthora_ramorum-RNCMPT00249-PBM/HughesRNA

Match Rank:6
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CGTHCAAK
TGTGCAA-
 A G T C A C T G A G C T G C T A A G T C C G T A C G T A C A T G
G A C T A C T G A C G T A C T G A G T C C G T A C G T A A C G T

WRKY25/MA1081.1/Jaspar

Match Rank:7
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CGTHCAAK
CGGTCAAC
 A G T C A C T G A G C T G C T A A G T C C G T A C G T A C A T G
A G T C C T A G A C T G A C G T A G T C C G T A C T G A G T A C

SPL5/MA1059.1/Jaspar

Match Rank:8
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CGTHCAAK
NCCGTACNN-
 A C G T A C G T A G T C A C T G A G C T G C T A A G T C C G T A C G T A C A T G
C T A G G T A C G A T C C T A G A C G T C T G A G A T C G C T A G T C A A C G T

bHLH28(bHLH)/col-bHLH28-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CGTHCAAK-
DTCCGTACADDN
 A C G T A C G T A C G T A G T C A C T G A G C T G C T A A G T C C G T A C G T A C A T G A C G T
C T A G C G A T G A T C A G T C A C T G A C G T C G T A A G T C T C G A C G T A C G A T G A C T

ct/MA0218.1/Jaspar

Match Rank:10
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CGTHCAAK
-GTTCAA-
 A G T C A C T G A G C T G C T A A G T C C G T A C G T A C A T G
A C G T A T C G G C A T A C G T A G T C C T G A C T G A A C G T