Information for 22-SCTTTTGAWCGC (Motif 19)

A T G C A G T C C G A T A C G T A C G T A C G T C T A G C G T A C G A T A G T C C T A G A G T C
Reverse Opposite:
A C T G G A T C T A C G C G T A A C G T A G T C C G T A C G T A C G T A C G T A A C T G T A C G
p-value:1e-13
log p-value:-3.053e+01
Information Content per bp:1.779
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif0.17%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets120.1 +/- 56.3bp
Average Position of motif in Background93.9 +/- 2.0bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sf3b4(RRM)/Danio_rerio-RNCMPT00224-PBM/HughesRNA

Match Rank:1
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:SCTTTTGAWCGC
-CTTTTGN----
 A T G C A G T C C G A T A C G T A C G T A C G T C T A G C G T A C G A T A G T C C T A G A G T C
A C G T A G T C A C G T A C G T A C G T A C G T C T A G G T C A A C G T A C G T A C G T A C G T

pan/dmmpmm(SeSiMCMC)/fly

Match Rank:2
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:SCTTTTGAWCGC
---TTTGATN--
 A T G C A G T C C G A T A C G T A C G T A C G T C T A G C G T A C G A T A G T C C T A G A G T C
A C G T A C G T A C G T G C A T C A G T C G A T C A T G C G T A G C A T T G C A A C G T A C G T

pan/dmmpmm(Pollard)/fly

Match Rank:3
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:SCTTTTGAWCGC
--CTTTGATC--
 A T G C A G T C C G A T A C G T A C G T A C G T C T A G C G T A C G A T A G T C C T A G A G T C
A C G T A C G T G A T C G A C T C G A T C G A T A C T G C T G A C G A T G T A C A C G T A C G T

pan/dmmpmm(Bigfoot)/fly

Match Rank:4
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:SCTTTTGAWCGC
---TTTGAT---
 A T G C A G T C C G A T A C G T A C G T A C G T C T A G C G T A C G A T A G T C C T A G A G T C
A C G T A C G T A C G T C G A T C A G T C G A T A C T G C G T A C G A T A C G T A C G T A C G T

Hoxd9/MA0913.1/Jaspar

Match Rank:5
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:SCTTTTGAWCGC
--TTTTTATTGC
 A T G C A G T C C G A T A C G T A C G T A C G T C T A G C G T A C G A T A G T C C T A G A G T C
A C G T A C G T C G A T G C A T C A G T C G A T C G A T C G T A G A C T A C G T C T A G A G T C

Arid3a/MA0151.1/Jaspar

Match Rank:6
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:SCTTTTGAWCGC
---TTTAAT---
 A T G C A G T C C G A T A C G T A C G T A C G T C T A G C G T A C G A T A G T C C T A G A G T C
A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T

pan/dmmpmm(Papatsenko)/fly

Match Rank:7
Score:0.69
Offset:2
Orientation:forward strand
Alignment:SCTTTTGAWCGC
--CTTTGAT---
 A T G C A G T C C G A T A C G T A C G T A C G T C T A G C G T A C G A T A G T C C T A G A G T C
A C G T A C G T A T G C C G A T A C G T G C A T C T A G C T G A C G A T A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:8
Score:0.68
Offset:2
Orientation:forward strand
Alignment:SCTTTTGAWCGC
--ATTTGAATT-
 A T G C A G T C C G A T A C G T A C G T A C G T C T A G C G T A C G A T A G T C C T A G A G T C
A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:9
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---SCTTTTGAWCGC--
AATCCCTTTGATCTATC
 A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A C G T C T A G C G T A C G A T A G T C C T A G A G T C A C G T A C G T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:10
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-SCTTTTGAWCGC
TNCCTTTGATGT-
 A C G T A T G C A G T C C G A T A C G T A C G T A C G T C T A G C G T A C G A T A G T C C T A G A G T C
C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T A C G T