Information for 23-GCTGTMCGKA (Motif 20)

T A C G A G T C C G A T C T A G A C G T G T A C A T G C A C T G C A T G C G T A
Reverse Opposite:
C G A T G T A C A G T C A T C G A C T G G T C A A G T C C G T A C T A G A G T C
p-value:1e-10
log p-value:-2.347e+01
Information Content per bp:1.774
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif41.4
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets95.2 +/- 59.0bp
Average Position of motif in Background116.3 +/- 50.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPL3(SBP)/colamp-SPL3-DAP-Seq(GSE60143)/Homer

Match Rank:1
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-GCTGTMCGKA-
WDTTGTACGGAH
 A C G T T A C G A G T C C G A T C T A G A C G T G T A C A T G C A C T G C A T G C G T A A C G T
C G A T C G A T A G C T A G C T A C T G A C G T C G T A A G T C A C T G A C T G C G T A G T A C

SPL13(SBP)/col-SPL13-DAP-Seq(GSE60143)/Homer

Match Rank:2
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GCTGTMCGKA-
WAHTGTACGGAH
 A C G T T A C G A G T C C G A T C T A G A C G T G T A C A T G C A C T G C A T G C G T A A C G T
G C T A C G T A G A C T A G C T A C T G A C G T C G T A A G T C A C T G C T A G G C T A G A T C

SPL14(SBP)/col-SPL14-DAP-Seq(GSE60143)/Homer

Match Rank:3
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--GCTGTMCGKA---
NNWHTGTACGGAHNH
 A C G T A C G T T A C G A G T C C G A T C T A G A C G T G T A C A T G C A C T G C A T G C G T A A C G T A C G T A C G T
C G T A G C T A C G T A G C A T A G C T A C T G A C G T C G T A A G T C A C T G A C T G G C T A G T C A C T G A G C T A

SPL14(SBP)/Arabidopsis thaliana/AthaMap

Match Rank:4
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----GCTGTMCGKA-----
CCCTNCTGTACGGACGNNA
 A C G T A C G T A C G T A C G T T A C G A G T C C G A T C T A G A C G T G T A C A T G C A C T G C A T G C G T A A C G T A C G T A C G T A C G T A C G T
G A T C A T G C T G A C G A C T G T A C A G T C A G C T A C T G A C G T C G T A A G T C A C T G A C T G G T C A T A G C C T A G T A G C C T A G T C G A

SPL14/MA0586.1/Jaspar

Match Rank:5
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----GCTGTMCGKA-----
CCCTNCTGTACGGACGNNA
 A C G T A C G T A C G T A C G T T A C G A G T C C G A T C T A G A C G T G T A C A T G C A C T G C A T G C G T A A C G T A C G T A C G T A C G T A C G T
G A T C A T G C T G A C G A C T G T A C A G T C A G C T A C T G A C G T C G T A A G T C A C T G A C T G G T C A T A G C C T A G T A G C C T A G T C G A

SPL5(SBP)/colamp-SPL5-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GCTGTMCGKA--
NNHGTACGGHNN
 T A C G A G T C C G A T C T A G A C G T G T A C A T G C A C T G C A T G C G T A A C G T A C G T
C G T A G C A T G A C T C T A G A C G T G T C A A G T C A C T G C T A G G C T A G T A C G C T A

bHLH28(bHLH)/col-bHLH28-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GCTGTMCGKA-
NHHTGTACGGAH
 A C G T T A C G A G T C C G A T C T A G A C G T G T A C A T G C A C T G C A T G C G T A A C G T
C T G A G C T A G C A T A G C T A C T G A C G T C G T A A G T C A C T G C T A G G C T A G A T C

ENOX1(RRM)/Homo_sapiens-RNCMPT00149-PBM/HughesRNA

Match Rank:8
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GCTGTMCGKA
-CTGTCTG--
 T A C G A G T C C G A T C T A G A C G T G T A C A T G C A C T G C A T G C G T A
A C G T A G T C A G C T C T A G A C G T T G A C A G C T C A T G A C G T A C G T

SPL11/MA1056.1/Jaspar

Match Rank:9
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GCTGTMCGKA-
TATCGTACGGAT
 A C G T T A C G A G T C C G A T C T A G A C G T G T A C A T G C A C T G C A T G C G T A A C G T
A C G T C G T A A G C T G A T C A C T G A C G T C G T A A G T C A C T G A C T G C G T A A G C T

SPL12/MA1057.1/Jaspar

Match Rank:10
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GCTGTMCGKA
--TGTACGGT
 T A C G A G T C C G A T C T A G A C G T G T A C A T G C A C T G C A T G C G T A
A C G T A C G T C G A T T C A G A G C T T G C A G T A C A C T G C T A G G C A T