Information for 24-TCCCTTAGGG (Motif 21)

A C G T A G T C A G T C A G T C A C G T A C G T C G T A A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C A C G T C G T A C G T A A C T G A C T G A C T G C G T A
p-value:1e-7
log p-value:-1.690e+01
Information Content per bp:1.530
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.11%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets91.0 +/- 55.2bp
Average Position of motif in Background56.4 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RPH1/Literature(Harbison)/Yeast

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:TCCCTTAGGG
CCCCTTAAGG
 A C G T A G T C A G T C A G T C A C G T A C G T C G T A A C T G A C T G A C T G
A G T C A G T C A G T C A G T C A C G T A C G T C G T A C G T A A C T G A C T G

RPH1(MacIsaac)/Yeast

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:TCCCTTAGGG
CCCCTTAAGG
 A C G T A G T C A G T C A G T C A C G T A C G T C G T A A C T G A C T G A C T G
A G T C A G T C A G T C A G T C A C G T A C G T C G T A C G T A A C T G A C T G

HNRNPA1L2(RRM)/Homo_sapiens-RNCMPT00023-PBM/HughesRNA

Match Rank:3
Score:0.73
Offset:4
Orientation:forward strand
Alignment:TCCCTTAGGG-
----TTAGGGA
 A C G T A G T C A G T C A G T C A C G T A C G T C G T A A C T G A C T G A C T G A C G T
A C G T A C G T A C G T A C G T C A G T A C G T C G T A A C T G A C T G A C T G C G T A

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:4
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TCCCTTAGGG---
NTGCCCTAGGGCAA
 A C G T A C G T A G T C A G T C A G T C A C G T A C G T C G T A A C T G A C T G A C T G A C G T A C G T A C G T
C G T A G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A G C T A

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:TCCCTTAGGG---
-GCCTCAGGGCAT
 A C G T A G T C A G T C A G T C A C G T A C G T C G T A A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:6
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TCCCTTAGGG
WTGSCCTSAGGS
 A C G T A C G T A C G T A G T C A G T C A G T C A C G T A C G T C G T A A C T G A C T G A C T G
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C

HNRNPA1(RRM)/Homo_sapiens-RNCMPT00022-PBM/HughesRNA

Match Rank:7
Score:0.71
Offset:4
Orientation:forward strand
Alignment:TCCCTTAGGG-
----NTAGGGA
 A C G T A G T C A G T C A G T C A C G T A C G T C G T A A C T G A C T G A C T G A C G T
A C G T A C G T A C G T A C G T C A G T A C G T C G T A A C T G A C T G A C T G C G T A

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:8
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--TCCCTTAGGG---
ATTCCCTGAGGGGAA
 A C G T A C G T A C G T A G T C A G T C A G T C A C G T A C G T C G T A A C T G A C T G A C T G A C G T A C G T A C G T
C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:9
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TCCCTTAGGG---
ATTGCCTGAGGCGAA
 A C G T A C G T A C G T A G T C A G T C A G T C A C G T A C G T C G T A A C T G A C T G A C T G A C G T A C G T A C G T
C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A

TBF1/MA0403.1/Jaspar

Match Rank:10
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:TCCCTTAGGG--
----NTAGGGTT
 A C G T A G T C A G T C A G T C A C G T A C G T C G T A A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A G C T C T G A A C T G A C T G A C T G A G C T G C A T