Information for 25-AGGTGCAATACG (Motif 23)

C G T A A C T G A C T G A C G T A C T G A G T C C G T A C G T A A C G T C G T A A G T C A C T G
Reverse Opposite:
A G T C A C T G A C G T C G T A A C G T A C G T A C T G A G T C C G T A A G T C A G T C A C G T
p-value:1e-5
log p-value:-1.323e+01
Information Content per bp:1.530
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.12%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets122.4 +/- 40.0bp
Average Position of motif in Background59.6 +/- 56.7bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AFT1/MA0269.1/Jaspar

Match Rank:1
Score:0.76
Offset:-6
Orientation:reverse strand
Alignment:------AGGTGCAATACG---
CNANNCGGGTGCAATATNNNA
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C G T A C T G A G T C C G T A C G T A A C G T C G T A A G T C A C T G A C G T A C G T A C G T
A T G C T G A C C G T A G C T A A C G T A T G C C T A G C A T G T C A G G A C T A T C G G A T C T C G A G T C A G C A T G T C A C A G T T A C G G A C T T C G A T G C A

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:2
Score:0.76
Offset:0
Orientation:forward strand
Alignment:AGGTGCAATACG
AGATGCAATCCC
 C G T A A C T G A C T G A C G T A C T G A G T C C G T A C G T A A C G T C G T A A G T C A C T G
T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C

PB0106.1_Arid5a_2/Jaspar

Match Rank:3
Score:0.72
Offset:1
Orientation:forward strand
Alignment:AGGTGCAATACG------
-CATACAATACGAAATAA
 C G T A A C T G A C T G A C G T A C T G A G T C C G T A C G T A A C G T C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A T G C C T A G G A C T C G T A T G A C C G T A T G C A A C G T T G C A T A G C T A C G C T G A C T G A C G T A A G C T T C G A T C G A

byn/dmmpmm(Bigfoot)/fly

Match Rank:4
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:AGGTGCAATACG
ANGTGCGA----
 C G T A A C T G A C T G A C G T A C T G A G T C C G T A C G T A A C G T C G T A A G T C A C T G
C G T A C A G T A C T G C G A T A C T G G A T C C T A G C G T A A C G T A C G T A C G T A C G T

SNF(RRM)/Drosophila_melanogaster-RNCMPT00145-PBM/HughesRNA

Match Rank:5
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:AGGTGCAATACG
-TGTGCAAT---
 C G T A A C T G A C T G A C G T A C T G A G T C C G T A C G T A A C G T C G T A A G T C A C T G
A C G T G A C T A C T G A C G T A C T G A G T C C G T A C G T A C G A T A C G T A C G T A C G T

byn/dmmpmm(Pollard)/fly

Match Rank:6
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AGGTGCAATACG
AAGTGCGA----
 C G T A A C T G A C T G A C G T A C T G A G T C C G T A C G T A A C G T C G T A A G T C A C T G
C G T A C G T A A C T G A G C T A C T G G A T C C T A G C G T A A C G T A C G T A C G T A C G T

Pr_0249(RRM)/Phytophthora_ramorum-RNCMPT00249-PBM/HughesRNA

Match Rank:7
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AGGTGCAATACG
-TGTGCAA----
 C G T A A C T G A C T G A C G T A C T G A G T C C G T A C G T A A C G T C G T A A G T C A C T G
A C G T G A C T A C T G A C G T A C T G A G T C C G T A C G T A A C G T A C G T A C G T A C G T

RCS1/RCS1_H2O2Hi/35-RCS1(Harbison)/Yeast

Match Rank:8
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AGGTGCAATACG
GGGTGCANT---
 C G T A A C T G A C T G A C G T A C T G A G T C C G T A C G T A A C G T C G T A A G T C A C T G
C T A G A C T G A C T G A G C T C T A G G A T C C T G A C T A G G C A T A C G T A C G T A C G T

RCS1(MacIsaac)/Yeast

Match Rank:9
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AGGTGCAATACG
GGGTGCA-----
 C G T A A C T G A C T G A C G T A C T G A G T C C G T A C G T A A C G T C G T A A G T C A C T G
T C A G C T A G A T C G A G C T C T A G A G T C T C G A A C G T A C G T A C G T A C G T A C G T

SKO1/MA0382.1/Jaspar

Match Rank:10
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:AGGTGCAATACG-
-----CATTACGT
 C G T A A C T G A C T G A C G T A C T G A G T C C G T A C G T A A C G T C G T A A G T C A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G A T A C G T C G T A A G T C A C T G A C G T