Information for 11-AAATGGCGGC (Motif 9)

C G T A G T C A C G T A A C G T A C T G A C T G A G T C A T C G A C T G G T A C
Reverse Opposite:
A C T G A G T C A T G C A C T G A G T C A G T C C G T A A C G T A C G T C G A T
p-value:1e-36
log p-value:-8.349e+01
Information Content per bp:1.954
Number of Target Sequences with motif265.0
Percentage of Target Sequences with motif4.01%
Number of Background Sequences with motif698.4
Percentage of Background Sequences with motif1.66%
Average Position of motif in Targets102.5 +/- 58.2bp
Average Position of motif in Background101.6 +/- 62.1bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RAP212(AP2EREBP)/col-RAP212-DAP-Seq(GSE60143)/Homer

Match Rank:1
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-AAATGGCGGC-
AAAATGGCGGCG
 A C G T C G T A G T C A C G T A A C G T A C T G A C T G A G T C A T C G A C T G G T A C A C G T
C T G A G C T A C G T A C T G A G A C T C A T G C T A G A G T C A C T G T A C G A G T C C A T G

ABR1(AP2EREBP)/colamp-ABR1-DAP-Seq(GSE60143)/Homer

Match Rank:2
Score:0.87
Offset:0
Orientation:forward strand
Alignment:AAATGGCGGC--
AAATGGCGGCGG
 C G T A G T C A C G T A A C G T A C T G A C T G A G T C A T C G A C T G G T A C A C G T A C G T
G C T A C G T A C G T A G C A T C A T G C T A G A G T C A C T G A C T G A G T C A C T G T C A G

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:AAATGGCGGC-
TAATGGCGGNC
 C G T A G T C A C G T A A C G T A C T G A C T G A G T C A T C G A C T G G T A C A C G T
G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

YY1(Zf)/Promoter/Homer

Match Rank:4
Score:0.85
Offset:-2
Orientation:forward strand
Alignment:--AAATGGCGGC
CAAGATGGCGGC
 A C G T A C G T C G T A G T C A C G T A A C G T A C T G A C T G A G T C A T C G A C T G G T A C
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

ERF13(AP2EREBP)/colamp-ERF13-DAP-Seq(GSE60143)/Homer

Match Rank:5
Score:0.84
Offset:1
Orientation:reverse strand
Alignment:AAATGGCGGC---
-AATGGCGGCTRA
 C G T A G T C A C G T A A C G T A C T G A C T G A G T C A T C G A C T G G T A C A C G T A C G T A C G T
A C G T C G T A C G T A G C A T A C T G C A T G A G T C A C T G C T A G A G T C A C G T T C G A G C T A

ERF9(AP2EREBP)/colamp-ERF9-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.83
Offset:0
Orientation:forward strand
Alignment:AAATGGCGGC--
AWATGGCGGCGG
 C G T A G T C A C G T A A C G T A C T G A C T G A G T C A T C G A C T G G T A C A C G T A C G T
G C T A C G T A C G T A G A C T C A T G C T A G G A T C A C T G T C A G G A T C A C T G T A C G

YY1/MA0095.2/Jaspar

Match Rank:7
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--AAATGGCGGC
CAAGATGGCGGC
 A C G T A C G T C G T A G T C A C G T A A C G T A C T G A C T G A G T C A T C G A C T G G T A C
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

AT4G18450(AP2EREBP)/col-AT4G18450-DAP-Seq(GSE60143)/Homer

Match Rank:8
Score:0.82
Offset:2
Orientation:forward strand
Alignment:AAATGGCGGC--
--ATGGCGGCKG
 C G T A G T C A C G T A A C G T A C T G A C T G A G T C A T C G A C T G G T A C A C G T A C G T
A C G T A C G T C T G A G C A T A C T G C T A G A G T C A C T G A C T G A G T C A C T G T C A G

RRTF1(AP2EREBP)/colamp-RRTF1-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:AAATGGCGGC--
AAATDGCGGCGG
 C G T A G T C A C G T A A C G T A C T G A C T G A G T C A T C G A C T G G T A C A C G T A C G T
G C T A C G T A C G T A G C A T C A G T C T A G A G T C A C T G A C T G A G T C A C T G T A C G

ERF105(AP2EREBP)/colamp-ERF105-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.81
Offset:3
Orientation:forward strand
Alignment:AAATGGCGGC-
---TGGCGGCT
 C G T A G T C A C G T A A C G T A C T G A C T G A G T C A T C G A C T G G T A C A C G T
A C G T A C G T A C G T G C A T A C T G C T A G A G T C A C T G A C T G A G T C A C G T