Motif Name	Consensus	P-value	Log P-value	q-value (Benjamini)	# of Target Sequences with Motif(of 6611)	% of Target Sequences with Motif	# of Background Sequences with Motif(of 41979)	% of Background Sequences with Motif
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	AYAGTGCCMYCTRGTGGCCA	1e-2997	-6.902e+03	0.0000	2865.0	43.34%	801.8	1.91%
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	CNNBRGCGCCCCCTGSTGGC	1e-2546	-5.864e+03	0.0000	3265.0	49.39%	1797.1	4.27%
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	GCCATCTGTT	1e-50	-1.154e+02	0.0000	773.0	11.69%	2798.9	6.65%
E2FA(E2FDP)/colamp-E2FA-DAP-Seq(GSE60143)/Homer	WWTGGCGCCAWWWNN	1e-49	-1.144e+02	0.0000	505.0	7.64%	1557.1	3.70%
LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer	AAGACCCYYN	1e-38	-8.935e+01	0.0000	1535.0	23.22%	7112.4	16.91%
SeqBias: CG bias	SSSSSSSSSS	1e-37	-8.733e+01	0.0000	5962.0	90.18%	35661.6	84.77%
Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer	TGTCANYT	1e-32	-7.537e+01	0.0000	1838.0	27.80%	9062.0	21.54%
COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer	AGRGGTCA	1e-31	-7.187e+01	0.0000	945.0	14.29%	4104.1	9.76%
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	NRYTTCCGGY	1e-31	-7.165e+01	0.0000	586.0	8.86%	2246.4	5.34%
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	CACAGCAGGGGG	1e-30	-6.976e+01	0.0000	692.0	10.47%	2800.9	6.66%
YY1(Zf)/Promoter/Homer	CAAGATGGCGGC	1e-30	-6.960e+01	0.0000	219.0	3.31%	575.6	1.37%
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	HACTTCCGGY	1e-29	-6.875e+01	0.0000	607.0	9.18%	2378.3	5.65%
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	AVCCGGAAGT	1e-27	-6.290e+01	0.0000	513.0	7.76%	1963.7	4.67%
ETS(ETS)/Promoter/Homer	AACCGGAAGT	1e-27	-6.251e+01	0.0000	336.0	5.08%	1119.1	2.66%
CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	TGCAGTTCCMVNWRTGGCCA	1e-26	-6.077e+01	0.0000	59.0	0.89%	61.2	0.15%
Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer	RGKGGGCGGAGC	1e-26	-6.076e+01	0.0000	1203.0	18.20%	5674.7	13.49%
GFY-Staf(?,Zf)/Promoter/Homer	RACTACAATTCCCAGAAKGC	1e-24	-5.739e+01	0.0000	118.0	1.78%	241.8	0.57%
Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer	GGCCYCCTGCTGDGH	1e-23	-5.328e+01	0.0000	1079.0	16.32%	5098.5	12.12%
Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer	RACTACAACTCCCAGVAKGC	1e-20	-4.790e+01	0.0000	97.0	1.47%	197.9	0.47%
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	GGCGGGAAAH	1e-20	-4.734e+01	0.0000	827.0	12.51%	3794.9	9.02%
Sp1(Zf)/Promoter/Homer	GGCCCCGCCCCC	1e-20	-4.705e+01	0.0000	589.0	8.91%	2518.3	5.99%
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	NRYTTCCGGH	1e-19	-4.388e+01	0.0000	849.0	12.84%	3968.1	9.43%
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	RACCGGAAGT	1e-18	-4.365e+01	0.0000	631.0	9.54%	2784.1	6.62%
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	CAAAGGTCAG	1e-18	-4.203e+01	0.0000	1173.0	17.74%	5828.7	13.85%
NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	CTGCGCATGCGC	1e-18	-4.202e+01	0.0000	350.0	5.29%	1348.4	3.21%
At1g75490(AP2EREBP)/colamp-At1g75490-DAP-Seq(GSE60143)/Homer	CACCGMCT	1e-16	-3.740e+01	0.0000	2388.0	36.12%	13179.5	31.33%
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	CWGGCGGGAA	1e-15	-3.681e+01	0.0000	548.0	8.29%	2432.5	5.78%
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	AGGTGTCA	1e-15	-3.670e+01	0.0000	1935.0	29.27%	10443.3	24.82%
NRF(NRF)/Promoter/Homer	STGCGCATGCGC	1e-15	-3.576e+01	0.0000	332.0	5.02%	1319.0	3.14%
SeqBias: polyA-repeat	AAAAAAAAAA	1e-15	-3.480e+01	0.0000	5373.0	81.27%	32497.8	77.25%
DEL2(E2FDP)/col-DEL2-DAP-Seq(GSE60143)/Homer	WTTTCSCGCC	1e-14	-3.438e+01	0.0000	445.0	6.73%	1917.7	4.56%
At5g18450(AP2EREBP)/col-At5g18450-DAP-Seq(GSE60143)/Homer	CACCGCTT	1e-14	-3.358e+01	0.0000	2948.0	44.59%	16764.6	39.85%
SeqBias: A/T bias	WWWWWWWWWW	1e-14	-3.354e+01	0.0000	3251.0	49.18%	18670.2	44.38%
NAM(NAC)/col-NAM-DAP-Seq(GSE60143)/Homer	RGTTRCGTRW	1e-14	-3.272e+01	0.0000	880.0	13.31%	4336.5	10.31%
DREB19(AP2EREBP)/colamp-DREB19-DAP-Seq(GSE60143)/Homer	AATGTCGGTK	1e-14	-3.226e+01	0.0000	622.0	9.41%	2901.7	6.90%
Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer	NNVVCAGCTGBN	1e-13	-3.041e+01	0.0000	1406.0	21.27%	7445.7	17.70%
ABR1(AP2EREBP)/colamp-ABR1-DAP-Seq(GSE60143)/Homer	AAATGGCGGCGG	1e-13	-3.040e+01	0.0000	1950.0	29.50%	10710.0	25.46%
KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer	NRGCCCCRCCCHBNN	1e-13	-3.034e+01	0.0000	457.0	6.91%	2034.6	4.84%
At2g33710(AP2EREBP)/colamp-At2g33710-DAP-Seq(GSE60143)/Homer	WTKGCGGCKR	1e-12	-2.970e+01	0.0000	3070.0	46.44%	17657.4	41.97%
SUT1?/SacCer-Promoters/Homer	CCCCGCGC	1e-12	-2.948e+01	0.0000	5466.0	82.68%	33281.7	79.11%
NAP(NAC)/col-NAP-DAP-Seq(GSE60143)/Homer	ARGTTACGTRTN	1e-12	-2.936e+01	0.0000	537.0	8.12%	2482.0	5.90%
ERF105(AP2EREBP)/colamp-ERF105-DAP-Seq(GSE60143)/Homer	TGGCGGCT	1e-12	-2.894e+01	0.0000	2959.0	44.76%	16986.5	40.38%
SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	AVCAGCTG	1e-12	-2.894e+01	0.0000	3569.0	53.99%	20843.4	49.54%
GFY(?)/Promoter/Homer	ACTACAATTCCC	1e-12	-2.836e+01	0.0000	99.0	1.50%	279.3	0.66%
E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	VDTTTCCCGCCA	1e-12	-2.828e+01	0.0000	249.0	3.77%	978.4	2.33%
ERF7(AP2EREBP)/col-ERF7-DAP-Seq(GSE60143)/Homer	ATGRCGGCGG	1e-12	-2.786e+01	0.0000	2483.0	37.56%	14057.0	33.41%
SeqBias: polyC-repeat	CCCCCCCCCC	1e-11	-2.755e+01	0.0000	6599.0	99.82%	41714.2	99.15%
E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer	BTKGGCGGGAAA	1e-11	-2.630e+01	0.0000	1037.0	15.69%	5378.8	12.79%
KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	DGGGYGKGGC	1e-11	-2.595e+01	0.0000	1170.0	17.70%	6166.9	14.66%
ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	AACCGGAAGT	1e-10	-2.531e+01	0.0000	828.0	12.52%	4191.9	9.96%
ERF11(AP2EREBP)/col-ERF11-DAP-Seq(GSE60143)/Homer	RTGGCGGCGG	1e-10	-2.530e+01	0.0000	2160.0	32.67%	12152.6	28.89%
AT1G12630(AP2EREBP)/colamp-AT1G12630-DAP-Seq(GSE60143)/Homer	TGTCGGCA	1e-10	-2.456e+01	0.0000	540.0	8.17%	2577.8	6.13%
ERF115(AP2EREBP)/colamp-ERF115-DAP-Seq(GSE60143)/Homer	WTKRCGGCGB	1e-10	-2.451e+01	0.0000	3052.0	46.17%	17730.2	42.14%
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	AVCAGGAAGT	1e-10	-2.439e+01	0.0000	642.0	9.71%	3151.5	7.49%
AT1G71450(AP2EREBP)/col-AT1G71450-DAP-Seq(GSE60143)/Homer	DHDWTGTCGGTG	1e-10	-2.358e+01	0.0000	2184.0	33.04%	12359.2	29.38%
RAP26(AP2EREBP)/colamp-RAP26-DAP-Seq(GSE60143)/Homer	HDATGGCGGCGG	1e-10	-2.304e+01	0.0000	2495.0	37.74%	14302.9	34.00%
ERF8(AP2EREBP)/colamp-ERF8-DAP-Seq(GSE60143)/Homer	CGCCGYCATW	1e-9	-2.246e+01	0.0000	2184.0	33.04%	12399.2	29.47%
ERF10(AP2EREBP)/col-ERF10-DAP-Seq(GSE60143)/Homer	RTGGCGGCGG	1e-9	-2.234e+01	0.0000	1854.0	28.04%	10380.7	24.67%
DEAR2(AP2EREBP)/colamp-DEAR2-DAP-Seq(GSE60143)/Homer	HCACCGACAWHD	1e-9	-2.214e+01	0.0000	1093.0	16.53%	5813.3	13.82%
AT1G28160(AP2EREBP)/colamp-AT1G28160-DAP-Seq(GSE60143)/Homer	GGCGGCGG	1e-9	-2.208e+01	0.0000	3599.0	54.44%	21293.2	50.61%
ERF5(AP2EREBP)/colamp-ERF5-DAP-Seq(GSE60143)/Homer	DCMGCCGCCA	1e-9	-2.197e+01	0.0000	1564.0	23.66%	8632.8	20.52%
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ACAGGAAGTG	1e-9	-2.162e+01	0.0000	675.0	10.21%	3395.8	8.07%
ERF13(AP2EREBP)/colamp-ERF13-DAP-Seq(GSE60143)/Homer	TYAGCCGCCATT	1e-9	-2.143e+01	0.0000	2134.0	32.28%	12129.3	28.83%
RAP211(AP2EREBP)/colamp-RAP211-DAP-Seq(GSE60143)/Homer	RGCCGGCYWW	1e-9	-2.110e+01	0.0000	2915.0	44.09%	17002.8	40.41%
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer	TRAGGTCA	1e-9	-2.099e+01	0.0000	1879.0	28.42%	10580.5	25.15%
AT4G18450(AP2EREBP)/col-AT4G18450-DAP-Seq(GSE60143)/Homer	ATGGCGGCKG	1e-8	-2.054e+01	0.0000	1416.0	21.42%	7786.0	18.51%
KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer	MKGGGYGTGGCC	1e-8	-2.033e+01	0.0000	1129.0	17.08%	6077.9	14.45%
AT3G10030(Trihelix)/colamp-AT3G10030-DAP-Seq(GSE60143)/Homer	GCCGTTAA	1e-8	-2.032e+01	0.0000	463.0	7.00%	2225.0	5.29%
CRF10(AP2EREBP)/col100-CRF10-DAP-Seq(GSE60143)/Homer	DCCGCCGYHA	1e-8	-2.031e+01	0.0000	3167.0	47.91%	18623.2	44.27%
Unknown3/Drosophila-Promoters/Homer	ACVAKCTGGCAGCGC	1e-8	-2.014e+01	0.0000	153.0	2.31%	581.4	1.38%
ERF4(AP2EREBP)/colamp-ERF4-DAP-Seq(GSE60143)/Homer	WDWTGGCGGCGG	1e-8	-2.010e+01	0.0000	2205.0	33.35%	12618.0	29.99%
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	GGCGGGAARN	1e-8	-1.970e+01	0.0000	960.0	14.52%	5096.8	12.11%
AT2G15740(C2H2)/col-AT2G15740-DAP-Seq(GSE60143)/Homer	DHNDWATCGATD	1e-8	-1.950e+01	0.0000	357.0	5.40%	1655.9	3.94%
Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)	NNAYTTCCTGHN	1e-8	-1.939e+01	0.0000	525.0	7.94%	2591.0	6.16%
ATAF1(NAC)/col-ATAF1-DAP-Seq(GSE60143)/Homer	YACGTMAY	1e-8	-1.920e+01	0.0000	2043.0	30.90%	11653.2	27.70%
MYB65(MYB)/colamp-MYB65-DAP-Seq(GSE60143)/Homer	RACNGTTA	1e-8	-1.878e+01	0.0000	647.0	9.79%	3298.5	7.84%
TGA3(bZIP)/colamp-TGA3-DAP-Seq(GSE60143)/Homer	WTGATGACGTCATCW	1e-8	-1.874e+01	0.0000	66.0	1.00%	190.9	0.45%
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ACAGGAAGTG	1e-8	-1.873e+01	0.0000	863.0	13.05%	4553.3	10.82%
DREB2(AP2EREBP)/col-DREB2-DAP-Seq(GSE60143)/Homer	TMACCGACATWA	1e-8	-1.850e+01	0.0000	400.0	6.05%	1908.5	4.54%
LBD23(LOBAS2)/colamp-LBD23-DAP-Seq(GSE60143)/Homer	GCGNAWWWTNCGCYW	1e-7	-1.822e+01	0.0000	1377.0	20.83%	7628.5	18.13%
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	ATGACGTCATCN	1e-7	-1.817e+01	0.0000	81.0	1.23%	258.7	0.61%
ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ACVAGGAAGT	1e-7	-1.795e+01	0.0000	376.0	5.69%	1785.2	4.24%
ERF3(AP2EREBP)/colamp-ERF3-DAP-Seq(GSE60143)/Homer	ATGGCGGCGG	1e-7	-1.760e+01	0.0000	1825.0	27.61%	10376.2	24.66%
CRF4(AP2EREBP)/colamp-CRF4-DAP-Seq(GSE60143)/Homer	CGCCGCCA	1e-7	-1.732e+01	0.0000	1826.0	27.62%	10393.7	24.71%
KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer	RGKGGGCGKGGC	1e-7	-1.718e+01	0.0000	1707.0	25.82%	9670.8	22.99%
MYB56(MYB)/colamp-MYB56-DAP-Seq(GSE60143)/Homer	HTAACGRMHY	1e-7	-1.710e+01	0.0000	459.0	6.94%	2264.8	5.38%
RRTF1(AP2EREBP)/colamp-RRTF1-DAP-Seq(GSE60143)/Homer	CCGCCGCHATTT	1e-7	-1.695e+01	0.0000	438.0	6.63%	2149.6	5.11%
CRE(bZIP)/Promoter/Homer	CSGTGACGTCAC	1e-7	-1.679e+01	0.0000	237.0	3.58%	1049.0	2.49%
TGA5(bZIP)/col-TGA5-DAP-Seq(GSE60143)/Homer	NNGATGACGTCATCN	1e-7	-1.655e+01	0.0000	82.0	1.24%	273.2	0.65%
ERF9(AP2EREBP)/colamp-ERF9-DAP-Seq(GSE60143)/Homer	AWATGGCGGCGG	1e-7	-1.630e+01	0.0000	955.0	14.45%	5165.0	12.28%
MYB101(MYB)/colamp-MYB101-DAP-Seq(GSE60143)/Homer	TAACNRMY	1e-7	-1.628e+01	0.0000	1230.0	18.61%	6809.6	16.19%
ESE3(AP2EREBP)/col-ESE3-DAP-Seq(GSE60143)/Homer	GACGGTGG	1e-7	-1.616e+01	0.0000	3006.0	45.47%	17791.8	42.29%
BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer	NHAACBGYYV	1e-6	-1.610e+01	0.0000	1072.0	16.22%	5868.4	13.95%
NFY(CCAAT)/Promoter/Homer	RGCCAATSRG	1e-6	-1.591e+01	0.0000	449.0	6.79%	2232.7	5.31%
ERF15(AP2EREBP)/colamp-ERF15-DAP-Seq(GSE60143)/Homer	WDHAGCMGCCAT	1e-6	-1.589e+01	0.0000	3261.0	49.33%	19417.5	46.15%
AT1G23810(Orphan)/col-AT1G23810-DAP-Seq(GSE60143)/Homer	TTCTAGAAGSTTCTA	1e-6	-1.582e+01	0.0000	24.0	0.36%	42.3	0.10%
ERF2(AP2EREBP)/colamp-ERF2-DAP-Seq(GSE60143)/Homer	GGCGGCTG	1e-6	-1.555e+01	0.0000	2303.0	34.84%	13415.4	31.89%
Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	GCCACACCCA	1e-6	-1.552e+01	0.0000	209.0	3.16%	918.3	2.18%
RAP212(AP2EREBP)/col-RAP212-DAP-Seq(GSE60143)/Homer	CGCCGCCATTTT	1e-6	-1.550e+01	0.0000	1677.0	25.37%	9553.6	22.71%
AT5G05550(Trihelix)/col-AT5G05550-DAP-Seq(GSE60143)/Homer	HDNHDTCKCCGGMGA	1e-6	-1.546e+01	0.0000	1537.0	23.25%	8699.2	20.68%
At5g08750(C3H)/col-At5g08750-DAP-Seq(GSE60143)/Homer	NWDTTGCGGCTR	1e-6	-1.520e+01	0.0000	455.0	6.88%	2281.4	5.42%
DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer	TAGCGCGC	1e-6	-1.514e+01	0.0000	1383.0	20.92%	7775.7	18.48%
ESE1(AP2EREBP)/col-ESE1-DAP-Seq(GSE60143)/Homer	GGCGGCGG	1e-6	-1.504e+01	0.0000	2435.0	36.83%	14261.9	33.90%
SHN3(AP2EREBP)/col-SHN3-DAP-Seq(GSE60143)/Homer	CCGCCGCC	1e-6	-1.474e+01	0.0000	1576.0	23.84%	8966.2	21.31%
MYB88(MYB)/col-MYB88-DAP-Seq(GSE60143)/Homer	HNACGCTCCT	1e-6	-1.445e+01	0.0000	2819.0	42.64%	16696.6	39.69%
MYB3R1(MYB)/col-MYB3R1-DAP-Seq(GSE60143)/Homer	WWDTDACCGTTR	1e-6	-1.443e+01	0.0000	163.0	2.47%	691.7	1.64%
E-box(bHLH)/Promoter/Homer	SSGGTCACGTGA	1e-6	-1.422e+01	0.0000	106.0	1.60%	405.0	0.96%
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	GGCVGTTR	1e-6	-1.418e+01	0.0000	1382.0	20.90%	7806.1	18.55%
ERF104(AP2EREBP)/col-ERF104-DAP-Seq(GSE60143)/Homer	GGCGGCGG	1e-6	-1.406e+01	0.0000	2741.0	41.46%	16225.2	38.57%
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	VACAGGAAAT	1e-6	-1.403e+01	0.0000	342.0	5.17%	1669.0	3.97%
Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer	GCCACRCCCACY	1e-5	-1.369e+01	0.0000	268.0	4.05%	1264.2	3.00%
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	AGAGGAAGTG	1e-5	-1.369e+01	0.0000	204.0	3.09%	917.1	2.18%
HSFA6A(HSF)/col-HSFA6A-DAP-Seq(GSE60143)/Homer	RGAAGNTTCTAGAAN	1e-5	-1.324e+01	0.0000	22.0	0.33%	42.9	0.10%
LBD18(LOBAS2)/colamp-LBD18-DAP-Seq(GSE60143)/Homer	CKGAWWTTCHGS	1e-5	-1.319e+01	0.0000	1267.0	19.17%	7148.0	16.99%
MYB3R4(MYB)/col-MYB3R4-DAP-Seq(GSE60143)/Homer	AWWTAACCGTTR	1e-5	-1.286e+01	0.0000	105.0	1.59%	413.6	0.98%
Tal1	CATCTG	1e-5	-1.252e+01	0.0000	712.0	10.77%	3843.6	9.14%
At1g19210(AP2EREBP)/colamp-At1g19210-DAP-Seq(GSE60143)/Homer	HCACCGACCAHN	1e-5	-1.246e+01	0.0000	1151.0	17.41%	6473.5	15.39%
AT5G23930(mTERF)/col-AT5G23930-DAP-Seq(GSE60143)/Homer	GGCGGCTG	1e-5	-1.240e+01	0.0000	3259.0	49.30%	19584.3	46.55%
LBD19(LOBAS2)/colamp-LBD19-DAP-Seq(GSE60143)/Homer	CCKGAAWTTCMGGAW	1e-5	-1.225e+01	0.0000	920.0	13.92%	5090.3	12.10%
HSFB4(HSF)/col-HSFB4-DAP-Seq(GSE60143)/Homer	TTCTAGAAGCTTCTA	1e-5	-1.215e+01	0.0000	19.0	0.29%	35.7	0.08%
MYB77(MYB)/col-MYB77-DAP-Seq(GSE60143)/Homer	NYAACBGYMC	1e-5	-1.208e+01	0.0000	909.0	13.75%	5030.0	11.96%
ANAC047(NAC)/colamp-ANAC047-DAP-Seq(GSE60143)/Homer	WACACGTAACTT	1e-5	-1.175e+01	0.0001	373.0	5.64%	1891.4	4.50%
Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	VCAGCTGYTG	1e-4	-1.142e+01	0.0001	981.0	14.84%	5487.3	13.04%
TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer	GTCACGTGACYV	1e-4	-1.118e+01	0.0001	70.0	1.06%	257.6	0.61%
ERF1(AP2EREBP)/colamp-ERF1-DAP-Seq(GSE60143)/Homer	GGCGGCTR	1e-4	-1.112e+01	0.0001	2008.0	30.37%	11797.3	28.04%
At3g60580(C2H2)/col-At3g60580-DAP-Seq(GSE60143)/Homer	WTTYTACT	1e-4	-1.097e+01	0.0001	2199.0	33.26%	12994.1	30.89%
TGA10(bZIP)/colamp-TGA10-DAP-Seq(GSE60143)/Homer	ATGACGTC	1e-4	-1.095e+01	0.0001	301.0	4.55%	1500.5	3.57%
MYB3R5(MYB)/col-MYB3R5-DAP-Seq(GSE60143)/Homer	THYAACGGTHAWAWT	1e-4	-1.091e+01	0.0001	47.0	0.71%	152.6	0.36%
AT1G10720(BSD)/col-AT1G10720-DAP-Seq(GSE60143)/Homer	TTCTAGAAKCTTCTA	1e-4	-1.059e+01	0.0002	15.0	0.23%	26.8	0.06%
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	VNRVCAGCTGGY	1e-4	-1.038e+01	0.0002	791.0	11.96%	4385.5	10.42%
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	RCCATMTGTT	1e-4	-1.035e+01	0.0002	1095.0	16.56%	6221.0	14.79%
ARF2(ARF)/col-ARF2-DAP-Seq(GSE60143)/Homer	TTGTCGGMWN	1e-4	-1.022e+01	0.0003	1438.0	21.75%	8321.0	19.78%
ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer	ATTTCCCAGVAKSCY	1e-4	-1.019e+01	0.0003	166.0	2.51%	765.5	1.82%
MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer	RTCATGTGAC	1e-4	-1.016e+01	0.0003	450.0	6.81%	2375.5	5.65%
MYB105(MYB)/colamp-MYB105-DAP-Seq(GSE60143)/Homer	RATWCCGTTA	1e-4	-1.005e+01	0.0003	309.0	4.67%	1566.0	3.72%
HSFA1E(HSF)/col-HSFA1E-DAP-Seq(GSE60143)/Homer	TTCTAGAAGCTTCTA	1e-4	-9.999e+00	0.0003	32.0	0.48%	92.6	0.22%
At5g65130(AP2EREBP)/colamp-At5g65130-DAP-Seq(GSE60143)/Homer	CCRCCGACAWTN	1e-4	-9.710e+00	0.0004	442.0	6.69%	2341.8	5.57%
ERF73(AP2EREBP)/col-ERF73-DAP-Seq(GSE60143)/Homer	CCGCCGCC	1e-4	-9.525e+00	0.0005	2224.0	33.64%	13232.4	31.45%
ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer	RCAGGATGTGGT	1e-4	-9.301e+00	0.0006	58.0	0.88%	215.4	0.51%
PUCHI(AP2EREBP)/colamp-PUCHI-DAP-Seq(GSE60143)/Homer	GCGCCGTY	1e-3	-9.200e+00	0.0007	2412.0	36.48%	14429.7	34.30%
SPL5(SBP)/colamp-SPL5-DAP-Seq(GSE60143)/Homer	NNHGTACGGHNN	1e-3	-9.199e+00	0.0007	409.0	6.19%	2163.5	5.14%
GFX(?)/Promoter/Homer	ATTCTCGCGAGA	1e-3	-8.998e+00	0.0008	34.0	0.51%	106.1	0.25%
CEJ1(AP2EREBP)/col-CEJ1-DAP-Seq(GSE60143)/Homer	WWTGTCGGTG	1e-3	-8.997e+00	0.0008	838.0	12.68%	4721.7	11.22%
At1g36060(AP2EREBP)/colamp-At1g36060-DAP-Seq(GSE60143)/Homer	NNWWKGTCGGTG	1e-3	-8.909e+00	0.0009	616.0	9.32%	3393.5	8.07%
bZIP50(bZIP)/colamp-bZIP50-DAP-Seq(GSE60143)/Homer	GATGACGTCA	1e-3	-8.716e+00	0.0010	516.0	7.81%	2806.8	6.67%
SeqBias: G/A bias	RRRRRRRRRR	1e-3	-8.713e+00	0.0010	6605.0	99.91%	41939.2	99.69%
MYB81(MYB)/col-MYB81-DAP-Seq(GSE60143)/Homer	NWAACSGWTWNN	1e-3	-8.674e+00	0.0011	669.0	10.12%	3718.6	8.84%
PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	MGGAAGTGAAAC	1e-3	-8.661e+00	0.0011	589.0	8.91%	3241.5	7.70%
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	GATGACGTCA	1e-3	-8.307e+00	0.0015	309.0	4.67%	1607.2	3.82%
AZF1(C2H2)/colamp-AZF1-DAP-Seq(GSE60143)/Homer	DKSWCACT	1e-3	-8.107e+00	0.0019	2340.0	35.40%	14047.6	33.39%
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer	TTCTAGAABNTTCTA	1e-3	-8.073e+00	0.0019	68.0	1.03%	276.4	0.66%
SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer	AAAGRGGAAGTG	1e-3	-7.951e+00	0.0021	118.0	1.78%	540.1	1.28%
bZIP18(bZIP)/colamp-bZIP18-DAP-Seq(GSE60143)/Homer	KGMCAGCTND	1e-3	-7.900e+00	0.0022	3176.0	48.04%	19337.1	45.96%
ASL18(LOBAS2)/colamp-ASL18-DAP-Seq(GSE60143)/Homer	CCGGAAAWTCMGGAR	1e-3	-7.877e+00	0.0023	1156.0	17.49%	6708.1	15.94%
Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer	VGCTGWCAVB	1e-3	-7.689e+00	0.0027	902.0	13.64%	5166.3	12.28%
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	TGGCAGTTGG	1e-3	-7.593e+00	0.0030	1038.0	15.70%	6000.5	14.26%
TGA2(bZIP)/colamp-TGA2-DAP-Seq(GSE60143)/Homer	ACGTCAYCHH	1e-3	-7.521e+00	0.0032	355.0	5.37%	1896.5	4.51%
TGA9(bZIP)/colamp-TGA9-DAP-Seq(GSE60143)/Homer	VTGACGTC	1e-3	-7.478e+00	0.0033	565.0	8.55%	3141.0	7.47%
CAMTA1(CAMTA)/col-CAMTA1-DAP-Seq(GSE60143)/Homer	WWAACGCGTT	1e-3	-7.316e+00	0.0039	679.0	10.27%	3832.7	9.11%
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	MACAGGAAGT	1e-3	-7.288e+00	0.0039	115.0	1.74%	534.3	1.27%
THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer	GGTCANYTGAGGWCA	1e-3	-7.284e+00	0.0039	198.0	3.00%	996.6	2.37%
ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer	ANCAGGAAGT	1e-3	-7.259e+00	0.0040	304.0	4.60%	1606.4	3.82%
STZ(C2H2)/colamp-STZ-DAP-Seq(GSE60143)/Homer	HNBTCACT	1e-3	-7.080e+00	0.0048	2488.0	37.63%	15048.8	35.77%
Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer	NRRTGACGTCAT	1e-3	-7.047e+00	0.0049	162.0	2.45%	798.2	1.90%
SeqBias: C/A-bias	MMMMMMMMMM	1e-3	-7.008e+00	0.0051	6581.0	99.55%	41744.5	99.22%
TSO1(CPP)/col-TSO1-DAP-Seq(GSE60143)/Homer	RAATTTRAAW	1e-3	-6.931e+00	0.0054	40.0	0.61%	149.0	0.35%
ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer	ARGAGGMCAAAATGW	1e-3	-6.921e+00	0.0054	63.0	0.95%	263.7	0.63%
MYB73(MYB)/col-MYB73-DAP-Seq(GSE60143)/Homer	NNNNHAACNGHHDHN	1e-3	-6.916e+00	0.0054	846.0	12.80%	4862.7	11.56%
MYB33(MYB)/col-MYB33-DAP-Seq(GSE60143)/Homer	DDTYNGTTAN	1e-2	-6.844e+00	0.0058	696.0	10.53%	3955.3	9.40%
HSF7(HSF)/colamp-HSF7-DAP-Seq(GSE60143)/Homer	TTCTAGAAGCTTCTA	1e-2	-6.842e+00	0.0058	54.0	0.82%	218.8	0.52%
ANAC079(NAC)/colamp-ANAC079-DAP-Seq(GSE60143)/Homer	TACACGCAACCT	1e-2	-6.767e+00	0.0062	190.0	2.87%	962.6	2.29%
TGA4(bZIP)/colamp-TGA4-DAP-Seq(GSE60143)/Homer	RTGACGTCAKCW	1e-2	-6.742e+00	0.0063	152.0	2.30%	748.4	1.78%
EMB1789(C3H)/col-EMB1789-DAP-Seq(GSE60143)/Homer	TWTTTACCGYND	1e-2	-6.688e+00	0.0066	160.0	2.42%	795.0	1.89%
NLP7(RWPRK)/col-NLP7-DAP-Seq(GSE60143)/Homer	TGRCCYTTCR	1e-2	-6.177e+00	0.0110	873.0	13.21%	5064.3	12.04%
MYB70(MYB)/col-MYB70-DAP-Seq(GSE60143)/Homer	WTAACNGTTA	1e-2	-6.092e+00	0.0119	641.0	9.70%	3656.8	8.69%
CELF2(RRM)/JSL1-CELF2-CLIP-Seq(GSE71264)/Homer	RGTGTCAG	1e-2	-6.075e+00	0.0121	194.0	2.93%	1001.8	2.38%
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	RGCCATTAAC	1e-2	-6.063e+00	0.0121	1896.0	28.68%	11408.1	27.12%
CBF3(AP2EREBP)/colamp-CBF3-DAP-Seq(GSE60143)/Homer	YNRCCGACATNN	1e-2	-6.062e+00	0.0121	356.0	5.38%	1948.0	4.63%
FEA4(bZIP)/Corn-FEA4-ChIP-Seq(GSE61954)/Homer	TGACGTCACS	1e-2	-6.053e+00	0.0121	606.0	9.17%	3446.7	8.19%
ARF16(ARF)/col-ARF16-DAP-Seq(GSE60143)/Homer	ATTTTACGAT	1e-2	-5.999e+00	0.0127	67.0	1.01%	295.6	0.70%
PHV(HB)/col-PHV-DAP-Seq(GSE60143)/Homer	RTAATSATTA	1e-2	-5.952e+00	0.0132	112.0	1.69%	540.4	1.28%
Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer	NGRTGACGTCAY	1e-2	-5.931e+00	0.0135	218.0	3.30%	1143.4	2.72%
SPL3(SBP)/colamp-SPL3-DAP-Seq(GSE60143)/Homer	WDTTGTACGGAH	1e-2	-5.906e+00	0.0137	41.0	0.62%	162.6	0.39%
LBD2(LOBAS2)/colamp-LBD2-DAP-Seq(GSE60143)/Homer	TCCGAWTTTTTCGGN	1e-2	-5.884e+00	0.0139	201.0	3.04%	1047.0	2.49%
SPL15(SBP)/colamp-SPL15-DAP-Seq(GSE60143)/Homer	WDWMMGTACADW	1e-2	-5.870e+00	0.0141	729.0	11.03%	4202.0	9.99%
ATHB15(HB)/col-ATHB15-DAP-Seq(GSE60143)/Homer	GYAATSATTA	1e-2	-5.679e+00	0.0169	101.0	1.53%	484.1	1.15%
ANAC046(NAC)/colamp-ANAC046-DAP-Seq(GSE60143)/Homer	ACACGYWAYC	1e-2	-5.671e+00	0.0170	901.0	13.63%	5263.7	12.51%
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	ATGACGTCATCY	1e-2	-5.578e+00	0.0185	138.0	2.09%	693.7	1.65%
Unknown3/Arabidopsis-Promoters/Homer	AYTAAACCGG	1e-2	-5.531e+00	0.0193	98.0	1.48%	470.4	1.12%
HY5(bZIP)/colamp-HY5-DAP-Seq(GSE60143)/Homer	RRTSACGTSD	1e-2	-5.513e+00	0.0196	534.0	8.08%	3035.1	7.21%
BIM3(bHLH)/col-BIM3-DAP-Seq(GSE60143)/Homer	TWVTCACGTGAB	1e-2	-5.474e+00	0.0202	98.0	1.48%	471.8	1.12%
AT5G47660(Trihelix)/colamp-AT5G47660-DAP-Seq(GSE60143)/Homer	AWTTTTACCG	1e-2	-5.468e+00	0.0203	534.0	8.08%	3037.5	7.22%
Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	ACAGCTGTTN	1e-2	-5.364e+00	0.0224	1986.0	30.04%	12025.7	28.58%
AT1G47655(C2C2dof)/colamp-AT1G47655-DAP-Seq(GSE60143)/Homer	YHACTTTTTS	1e-2	-5.220e+00	0.0257	1512.0	22.87%	9073.7	21.57%
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	ADGGYAGYAGCATCT	1e-2	-5.203e+00	0.0260	379.0	5.73%	2116.7	5.03%
LBD13(LOBAS2)/colamp-LBD13-DAP-Seq(GSE60143)/Homer	KCCGTNWTTTBCGGC	1e-2	-5.133e+00	0.0277	1198.0	18.12%	7128.5	16.94%
bHLH10(bHLH)/colamp-bHLH10-DAP-Seq(GSE60143)/Homer	YACCGACA	1e-2	-5.036e+00	0.0304	257.0	3.89%	1397.9	3.32%
TCX2(CPP)/colamp-TCX2-DAP-Seq(GSE60143)/Homer	NNWWTTYRAAHN	1e-2	-5.020e+00	0.0307	485.0	7.34%	2761.3	6.56%
Dorsal(RHD)/Embryo-dl-ChIP-Seq(GSE65441)/Homer	GGGAAAAMCCCG	1e-2	-4.954e+00	0.0327	118.0	1.78%	593.1	1.41%
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	GCTGTGGTTW	1e-2	-4.945e+00	0.0328	334.0	5.05%	1857.1	4.41%
JGL(C2H2)/col-JGL-DAP-Seq(GSE60143)/Homer	ACYTTCAGTT	1e-2	-4.890e+00	0.0345	653.0	9.88%	3788.2	9.00%
MYB98(MYB)/col-MYB98-DAP-Seq(GSE60143)/Homer	NWDCCGTTAC	1e-2	-4.886e+00	0.0345	173.0	2.62%	910.3	2.16%
bHLH28(bHLH)/col-bHLH28-DAP-Seq(GSE60143)/Homer	NHHTGTACGGAH	1e-2	-4.749e+00	0.0393	262.0	3.96%	1436.4	3.41%
SPL14(SBP)/col-SPL14-DAP-Seq(GSE60143)/Homer	NNWHTGTACGGAHNH	1e-2	-4.740e+00	0.0395	145.0	2.19%	752.7	1.79%
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	CTTCCGGGAA	1e-2	-4.693e+00	0.0412	220.0	3.33%	1190.3	2.83%
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer	CTGTTTAC	1e-2	-4.620e+00	0.0441	853.0	12.90%	5030.6	11.96%
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	ATTTCCTGTN	1e-1	-4.591e+00	0.0452	268.0	4.05%	1477.5	3.51%
SOL1(CPP)/colamp-SOL1-DAP-Seq(GSE60143)/Homer	ATTTAAATHN	1e-1	-4.556e+00	0.0465	460.0	6.96%	2631.5	6.25%
SeqBias: CG-repeat	CGCGCGCGCG	1e-1	-4.533e+00	0.0474	3588.0	54.27%	22236.9	52.86%
SPL1(SBP)/colamp-SPL1-DAP-Seq(GSE60143)/Homer	HYGTACDTWH	1e-1	-4.533e+00	0.0474	928.0	14.04%	5498.0	13.07%
Unknown6/Drosophila-Promoters/Homer	AATTTTAAAA	1e-1	-4.502e+00	0.0485	230.0	3.48%	1255.0	2.98%
JKD(C2H2)/col-JKD-DAP-Seq(GSE60143)/Homer	TTTTGTCGTTTT	1e-1	-4.454e+00	0.0506	64.0	0.97%	301.6	0.72%
AT2G20110(CPP)/colamp-AT2G20110-DAP-Seq(GSE60143)/Homer	ATTYAAATHY	1e-1	-4.389e+00	0.0537	462.0	6.99%	2651.0	6.30%
TGA1(bZIP)/colamp-TGA1-DAP-Seq(GSE60143)/Homer	TGACGTCAKC	1e-1	-4.293e+00	0.0589	198.0	3.00%	1073.5	2.55%
At2g44940(AP2EREBP)/colamp-At2g44940-DAP-Seq(GSE60143)/Homer	NYACCGACAHNNNNN	1e-1	-4.253e+00	0.0610	152.0	2.30%	805.5	1.91%
At5g04390(C2H2)/col200-At5g04390-DAP-Seq(GSE60143)/Homer	AGTGANDN	1e-1	-4.221e+00	0.0627	2330.0	35.24%	14289.3	33.97%
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	TGCGTGGGYG	1e-1	-4.220e+00	0.0627	637.0	9.64%	3727.9	8.86%
HSF6(HSF)/col-HSF6-DAP-Seq(GSE60143)/Homer	TTYTAGAAGCTTCTA	1e-1	-4.206e+00	0.0630	64.0	0.97%	305.0	0.73%
HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer	GTTAATNATTAA	1e-1	-4.058e+00	0.0728	55.0	0.83%	258.1	0.61%
HSFC1(HSF)/col-HSFC1-DAP-Seq(GSE60143)/Homer	HTTCTAGAADCTTCT	1e-1	-3.991e+00	0.0774	57.0	0.86%	270.8	0.64%
At1g22810(AP2EREBP)/colamp-At1g22810-DAP-Seq(GSE60143)/Homer	BCACCGACANNN	1e-1	-3.962e+00	0.0794	409.0	6.19%	2350.3	5.59%
CAMTA5(CAMTA)/col-CAMTA5-DAP-Seq(GSE60143)/Homer	ACGCGTTTTANACRC	1e-1	-3.937e+00	0.0811	217.0	3.28%	1197.3	2.85%
AT3G60490(AP2EREBP)/colamp-AT3G60490-DAP-Seq(GSE60143)/Homer	NNRCCGACANNNNNN	1e-1	-3.930e+00	0.0812	242.0	3.66%	1346.2	3.20%
SPL13(SBP)/col-SPL13-DAP-Seq(GSE60143)/Homer	WAHTGTACGGAH	1e-1	-3.908e+00	0.0827	82.0	1.24%	411.7	0.98%
AT1G76880(Trihelix)/col-AT1G76880-DAP-Seq(GSE60143)/Homer	ACGGTAAAAW	1e-1	-3.901e+00	0.0829	133.0	2.01%	704.7	1.68%
CDM1(C3H)/colamp-CDM1-DAP-Seq(GSE60143)/Homer	CCGAWAWTWTCGGAN	1e-1	-3.863e+00	0.0857	66.0	1.00%	322.7	0.77%
Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer	AGGVNCCTTTGT	1e-1	-3.846e+00	0.0868	346.0	5.23%	1974.8	4.69%
NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer	ACCATCTGTT	1e-1	-3.842e+00	0.0868	910.0	13.76%	5434.6	12.92%
LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer	RGGTTACTANAGGTCA	1e-1	-3.789e+00	0.0911	19.0	0.29%	73.0	0.17%
AT3G57600(AP2EREBP)/col-AT3G57600-DAP-Seq(GSE60143)/Homer	GGCGGTGG	1e-1	-3.780e+00	0.0915	1966.0	29.74%	12039.7	28.62%
AGL95(ND)/col-AGL95-DAP-Seq(GSE60143)/Homer	TTCTAGAAGCTTCTA	1e-1	-3.750e+00	0.0939	29.0	0.44%	123.6	0.29%
LIN-15B(Zf)/cElegans-L3-LIN15B-ChIP-Seq(modEncode)/Homer	CARTGGAGCGCRYTTGCATT	1e-1	-3.730e+00	0.0953	9.0	0.14%	26.7	0.06%
Initiator/Drosophila-Promoters/Homer	NTCAGTYG	1e-1	-3.713e+00	0.0966	888.0	13.43%	5307.6	12.62%
At4g31060(AP2EREBP)/colamp-At4g31060-DAP-Seq(GSE60143)/Homer	CACCGACAAW	1e-1	-3.689e+00	0.0985	321.0	4.86%	1830.3	4.35%
HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer	TTTTATKRGG	1e-1	-3.661e+00	0.1009	411.0	6.22%	2377.6	5.65%
MYB41(MYB)/col-MYB41-DAP-Seq(GSE60143)/Homer	BYTYACCTAA	1e-1	-3.657e+00	0.1009	125.0	1.89%	664.3	1.58%
LEP(AP2EREBP)/col-LEP-DAP-Seq(GSE60143)/Homer	CDCCGCCGTC	1e-1	-3.629e+00	0.1033	1245.0	18.83%	7534.2	17.91%
DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer	NWTAAYCYAATCAWN	1e-1	-3.586e+00	0.1073	16.0	0.24%	59.8	0.14%
CDF3(C2C2dof)/colamp-CDF3-DAP-Seq(GSE60143)/Homer	AAAAGTRM	1e-1	-3.584e+00	0.1073	720.0	10.89%	4277.6	10.17%
AT1G76870(Trihelix)/col-AT1G76870-DAP-Seq(GSE60143)/Homer	AAAACCRGWW	1e-1	-3.580e+00	0.1073	146.0	2.21%	789.3	1.88%
DREB26(AP2EREBP)/col-DREB26-DAP-Seq(GSE60143)/Homer	CCACCGACAH	1e-1	-3.524e+00	0.1128	312.0	4.72%	1783.9	4.24%
bHLH157(bHLH)/col-bHLH157-DAP-Seq(GSE60143)/Homer	KACACGTCTCTY	1e-1	-3.520e+00	0.1128	112.0	1.69%	592.4	1.41%
At4g28140(AP2EREBP)/colamp-At4g28140-DAP-Seq(GSE60143)/Homer	DCCACCGACCAW	1e-1	-3.500e+00	0.1146	330.0	4.99%	1893.6	4.50%
IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer	GRAASTGAAAST	1e-1	-3.499e+00	0.1146	127.0	1.92%	680.4	1.62%
GTL1(Trihelix)/colamp-GTL1-DAP-Seq(GSE60143)/Homer	WWTTTACCKY	1e-1	-3.375e+00	0.1287	403.0	6.10%	2343.6	5.57%
MYB118(MYB)/colamp-MYB118-DAP-Seq(GSE60143)/Homer	TAWCCGTTAC	1e-1	-3.367e+00	0.1293	178.0	2.69%	985.5	2.34%
ANAC038(NAC)/col-ANAC038-DAP-Seq(GSE60143)/Homer	ACACGTWAYC	1e-1	-3.360e+00	0.1296	961.0	14.54%	5787.1	13.76%
SeqBias: TA-repeat	TATATATATA	1e-1	-3.343e+00	0.1313	816.0	12.34%	4888.6	11.62%
Unknown1/Arabidopsis-Promoters/Homer	RGGGTAWWWTHGTAA	1e-1	-3.318e+00	0.1341	29.0	0.44%	128.3	0.30%
Rap210(AP2EREBP)/col-Rap210-DAP-Seq(GSE60143)/Homer	TGTCGGCA	1e-1	-3.309e+00	0.1348	520.0	7.87%	3063.5	7.28%
MYB113(MYB)/col-MYB113-DAP-Seq(GSE60143)/Homer	HNDAWTCMGTTAYWN	1e-1	-3.297e+00	0.1360	189.0	2.86%	1053.1	2.50%
HAT2(Homeobox)/colamp-HAT2-DAP-Seq(GSE60143)/Homer	CYAATSATTR	1e-1	-3.283e+00	0.1373	229.0	3.46%	1293.8	3.08%
Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	GTCACGTGGT	1e-1	-3.223e+00	0.1451	179.0	2.71%	996.7	2.37%
CBF2(AP2EREBP)/colamp-CBF2-DAP-Seq(GSE60143)/Homer	YBRCCGACATNNNNN	1e-1	-3.183e+00	0.1505	314.0	4.75%	1811.0	4.30%
ATY13(MYB)/col-ATY13-DAP-Seq(GSE60143)/Homer	YYYAACYRHH	1e-1	-3.182e+00	0.1505	1519.0	22.98%	9290.4	22.08%
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	CTAATKGV	1e-1	-3.167e+00	0.1517	765.0	11.57%	4585.1	10.90%
At4g16750(AP2EREBP)/col-At4g16750-DAP-Seq(GSE60143)/Homer	HACCGACAHA	1e-1	-3.160e+00	0.1523	588.0	8.89%	3491.6	8.30%
ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer	TGGAACAGMA	1e-1	-3.159e+00	0.1523	477.0	7.22%	2808.6	6.68%
CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer	NGYCATAAAWCH	1e-1	-3.114e+00	0.1582	355.0	5.37%	2064.2	4.91%
TINY(AP2EREBP)/col-TINY-DAP-Seq(GSE60143)/Homer	NNCACCGACA	1e-1	-3.111e+00	0.1582	227.0	3.43%	1288.3	3.06%
BIM1(bHLH)/colamp-BIM1-DAP-Seq(GSE60143)/Homer	NNNNNNVTCACGTGM	1e-1	-3.085e+00	0.1615	87.0	1.32%	458.5	1.09%
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	MTGATGCAAT	1e-1	-3.043e+00	0.1679	121.0	1.83%	658.8	1.57%
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer	TBGCACGCAA	1e-1	-3.031e+00	0.1692	688.0	10.41%	4118.7	9.79%
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	ATTGCATCAT	1e-1	-2.988e+00	0.1759	84.0	1.27%	443.2	1.05%
MYB44(MYB)/colamp-MYB44-DAP-Seq(GSE60143)/Homer	CVGTTWWKTCNGTTA	1e-1	-2.958e+00	0.1806	30.0	0.45%	138.3	0.33%
AT1G77200(AP2EREBP)/colamp-AT1G77200-DAP-Seq(GSE60143)/Homer	ACCGACAHWD	1e-1	-2.914e+00	0.1881	595.0	9.00%	3551.2	8.44%
MYB3(MYB)/Arabidopsis-MYB3-ChIP-Seq(GSE80564)/Homer	GKTAGGTRGG	1e-1	-2.899e+00	0.1901	743.0	11.24%	4469.6	10.62%
AT5G59990(C2C2COlike)/colamp-AT5G59990-DAP-Seq(GSE60143)/Homer	TCTCAACCGTTCATT	1e-1	-2.873e+00	0.1945	12.0	0.18%	45.5	0.11%
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	TGCTGACTCA	1e-1	-2.851e+00	0.1981	495.0	7.49%	2939.0	6.99%
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer	GGTTAAWCATTAA	1e-1	-2.841e+00	0.1993	42.0	0.64%	206.7	0.49%
MYB119(MYB)/colamp-MYB119-DAP-Seq(GSE60143)/Homer	YRACCGTTACDD	1e-1	-2.769e+00	0.2134	172.0	2.60%	971.8	2.31%
OBP3(C2C2dof)/col-OBP3-DAP-Seq(GSE60143)/Homer	NYWACTTTTT	1e-1	-2.748e+00	0.2171	1258.0	19.03%	7697.7	18.30%
AT2G31460(REMB3)/col-AT2G31460-DAP-Seq(GSE60143)/Homer	WNWARWDGAAATGAT	1e-1	-2.740e+00	0.2180	113.0	1.71%	620.2	1.47%
Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer	SNGCACCTGCHS	1e-1	-2.706e+00	0.2247	474.0	7.17%	2818.6	6.70%
RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	GGGRAARRGRMCAGMTG	1e-1	-2.692e+00	0.2272	171.0	2.59%	968.8	2.30%
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	NCYAATAAAA	1e-1	-2.668e+00	0.2317	374.0	5.66%	2205.8	5.24%
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	SAAACCACAG	1e-1	-2.654e+00	0.2341	286.0	4.33%	1667.9	3.96%
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	GTTGCCATGGCAACM	1e-1	-2.652e+00	0.2341	82.0	1.24%	440.5	1.05%
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	NNTGTGGATTSS	1e-1	-2.636e+00	0.2367	196.0	2.96%	1121.2	2.66%
AtGRF6(GRF)/col-AtGRF6-DAP-Seq(GSE60143)/Homer	NTGTCAGADNNNNNN	1e-1	-2.626e+00	0.2384	570.0	8.62%	3417.1	8.12%
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	CGGTTGCCATGGCAAC	1e-1	-2.615e+00	0.2401	82.0	1.24%	441.8	1.05%
ANAC042(NAC)/col-ANAC042-DAP-Seq(GSE60143)/Homer	CGTNDHNDHNACGKY	1e-1	-2.612e+00	0.2401	1476.0	22.33%	9080.1	21.58%
caudal(Homeobox)/Drosophila-Embryos-ChIP-Chip(modEncode)/Homer	GGYCATAAAW	1e-1	-2.583e+00	0.2462	297.0	4.49%	1738.1	4.13%
ATHB20(Homeobox)/colamp-ATHB20-DAP-Seq(GSE60143)/Homer	CAATHATT	1e-1	-2.570e+00	0.2485	122.0	1.85%	679.8	1.62%
PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GTCACGCTCSCTGM	1e-1	-2.551e+00	0.2522	62.0	0.94%	326.6	0.78%
TCP1(TCP)/col-TCP1-DAP-Seq(GSE60143)/Homer	GGGGGCCCMMCN	1e-1	-2.535e+00	0.2556	220.0	3.33%	1271.7	3.02%
HSFB3(HSF)/colamp-HSFB3-DAP-Seq(GSE60143)/Homer	TTCTAGAAGMTTHTW	1e-1	-2.525e+00	0.2571	18.0	0.27%	79.3	0.19%
TGA6(bZIP)/colamp-TGA6-DAP-Seq(GSE60143)/Homer	TGACGTCABC	1e-1	-2.518e+00	0.2581	309.0	4.67%	1815.3	4.31%
KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer	GGGGGTGTGTCC	1e-1	-2.511e+00	0.2591	242.0	3.66%	1406.3	3.34%
SPL11(SBP)/col100-SPL11-DAP-Seq(GSE60143)/Homer	YTGTACTTBH	1e-1	-2.451e+00	0.2741	252.0	3.81%	1470.9	3.50%
Unknown5/Drosophila-Promoters/Homer	GCTGATAASV	1e-1	-2.346e+00	0.3034	273.0	4.13%	1604.4	3.81%
Knotted(Homeobox)/Corn-KN1-ChIP-Seq(GSE39161)/Homer	GAYGNGACRGGN	1e-1	-2.337e+00	0.3051	805.0	12.18%	4903.1	11.65%
DDF2(AP2EREBP)/col-DDF2-DAP-Seq(GSE60143)/Homer	GATGTCGRCR	1e-1	-2.337e+00	0.3051	26.0	0.39%	125.1	0.30%
HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	BSTTCTRGAABVTTCYAGAA	1e-1	-2.332e+00	0.3051	48.0	0.73%	250.9	0.60%
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	NWAACCACADNN	1e-1	-2.329e+00	0.3051	310.0	4.69%	1832.8	4.36%
At1g14580(C2H2)/colamp-At1g14580-DAP-Seq(GSE60143)/Homer	CASAAAAMGACAAAA	1e-1	-2.329e+00	0.3051	53.0	0.80%	279.9	0.67%
DDF1(AP2EREBP)/col-DDF1-DAP-Seq(GSE60143)/Homer	GCCGACAT	1e-1	-2.322e+00	0.3051	278.0	4.21%	1636.1	3.89%
TATA-Box(TBP)/Promoter/Homer	CCTTTTAWAGSC	1e-1	-2.316e+00	0.3054	463.0	7.00%	2777.7	6.60%
E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	NVCACCTGBN	1e-1	-2.314e+00	0.3054	985.0	14.90%	6031.9	14.34%
IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	GAAAGTGAAAGT	1e0	-2.276e+00	0.3155	49.0	0.74%	257.1	0.61%
EFL-1(E2F)/cElegans-L1-EFL1-ChIP-Seq(modEncode)/Homer	TGCAARYGCGCTCYA	1e0	-2.260e+00	0.3196	22.0	0.33%	104.2	0.25%
REB1/SacCer-Promoters/Homer	KCCGGGTAAYRR	1e0	-2.252e+00	0.3210	87.0	1.32%	481.0	1.14%
At4g32800(AP2EREBP)/colamp-At4g32800-DAP-Seq(GSE60143)/Homer	DYCACCGACAHWWWH	1e0	-2.239e+00	0.3241	78.0	1.18%	428.1	1.02%
At1g77640(AP2EREBP)/col-At1g77640-DAP-Seq(GSE60143)/Homer	TGTCGGTGGA	1e0	-2.237e+00	0.3241	195.0	2.95%	1133.9	2.70%
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	DRTGTTGCAA	1e0	-2.191e+00	0.3381	295.0	4.46%	1748.9	4.16%
CBF1(AP2EREBP)/colamp-CBF1-DAP-Seq(GSE60143)/Homer	YRCCGACATN	1e0	-2.188e+00	0.3381	519.0	7.85%	3134.3	7.45%
SPL9(SBP)/colamp-SPL9-DAP-Seq(GSE60143)/Homer	BTGTACTT	1e0	-2.160e+00	0.3464	1137.0	17.20%	7001.1	16.64%
GT3a(Trihelix)/col-GT3a-DAP-Seq(GSE60143)/Homer	WNACACGTGTYWWAW	1e0	-2.159e+00	0.3464	70.0	1.06%	383.6	0.91%
ERF38(AP2EREBP)/col-ERF38-DAP-Seq(GSE60143)/Homer	CACCGACA	1e0	-2.153e+00	0.3465	428.0	6.47%	2572.4	6.11%
ABF1(bZIP)/Arabidopsis-ABF1-ChIP-Seq(GSE80564)/Homer	CACGTGGC	1e0	-2.153e+00	0.3465	702.0	10.62%	4277.4	10.17%
AT1G20910(ARID)/col-AT1G20910-DAP-Seq(GSE60143)/Homer	THAATTRAWN	1e0	-2.125e+00	0.3542	500.0	7.56%	3021.9	7.18%
HuR(?)/HEK293-HuR-CLIP-Seq(GSE87887)/Homer	BTTTGGTTTG	1e0	-2.116e+00	0.3560	1382.0	20.90%	8547.9	20.32%
T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer	ACTTTCGTTTCT	1e0	-2.097e+00	0.3618	4.0	0.06%	12.7	0.03%
CES-1(Homeobox)/cElegans-L1-CES1-ChIP-Seq(modEncode)/Homer	AAATTSAATTTN	1e0	-2.094e+00	0.3619	164.0	2.48%	951.7	2.26%
AT1G24250(Orphan)/col-AT1G24250-DAP-Seq(GSE60143)/Homer	KTDGTTGGTDGTTGG	1e0	-2.062e+00	0.3722	94.0	1.42%	529.3	1.26%
SeqBias: GCW-triplet	GCWGCWGCWGCW	1e0	-2.043e+00	0.3782	6611.0	100.00%	42057.1	99.97%
PABPC1(?)/MEL-PABC1-CLIP-Seq(GSE69755)/Homer	HAATAAAGNN	1e0	-2.025e+00	0.3838	629.0	9.51%	3833.6	9.11%
ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer	GRTGMTRGAGCC	1e0	-1.996e+00	0.3940	360.0	5.45%	2162.8	5.14%
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	AAACCACARM	1e0	-1.990e+00	0.3949	408.0	6.17%	2460.2	5.85%
FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer	AGGTCANTGACCTB	1e0	-1.963e+00	0.4045	153.0	2.31%	891.0	2.12%
AT3G16280(AP2EREBP)/colamp-AT3G16280-DAP-Seq(GSE60143)/Homer	HCACCGACAHHDHHN	1e0	-1.932e+00	0.4162	253.0	3.83%	1505.6	3.58%
IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	GAAASYGAAASY	1e0	-1.925e+00	0.4176	44.0	0.67%	236.7	0.56%
GT2(Trihelix)/colamp-GT2-DAP-Seq(GSE60143)/Homer	AMGGTAAAWWWN	1e0	-1.918e+00	0.4194	367.0	5.55%	2211.4	5.26%
Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer	CCTGCTGAGH	1e0	-1.912e+00	0.4206	834.0	12.62%	5127.3	12.19%
AT3G09735(S1Falike)/col-AT3G09735-DAP-Seq(GSE60143)/Homer	TTCTAGAANMTTCTA	1e0	-1.905e+00	0.4223	105.0	1.59%	601.6	1.43%
Trl(Zf)/S2-GAGAfactor-ChIP-Seq(GSE40646)/Homer	RGAGAGAG	1e0	-1.849e+00	0.4452	2038.0	30.83%	12727.0	30.25%
HAT1(Homeobox)/col-HAT1-DAP-Seq(GSE60143)/Homer	SCAATCATTGNN	1e0	-1.848e+00	0.4452	43.0	0.65%	232.2	0.55%
Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer	AAACMATTAN	1e0	-1.828e+00	0.4518	158.0	2.39%	927.7	2.21%
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	SVYTTCCNGGAARB	1e0	-1.823e+00	0.4528	303.0	4.58%	1821.8	4.33%
ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer	GARTGGTCATCGCCC	1e0	-1.804e+00	0.4599	58.0	0.88%	322.5	0.77%
HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer	VCAGCTGBNN	1e0	-1.779e+00	0.4703	1493.0	22.58%	9292.5	22.09%
MGP(C2H2)/colamp-MGP-DAP-Seq(GSE60143)/Homer	TTTTGTCGTTTW	1e0	-1.766e+00	0.4751	69.0	1.04%	389.8	0.93%
AT2G20400(G2like)/colamp-AT2G20400-DAP-Seq(GSE60143)/Homer	DNVGAATATTCBNHN	1e0	-1.766e+00	0.4751	35.0	0.53%	188.0	0.45%
SeqBias: GA-repeat	GAGAGAGAGA	1e0	-1.739e+00	0.4849	3449.0	52.17%	21704.1	51.59%
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	ASWTCCTGBT	1e0	-1.658e+00	0.5241	431.0	6.52%	2630.8	6.25%
NUC(C2H2)/col-NUC-DAP-Seq(GSE60143)/Homer	HAVAAAACGACAAAA	1e0	-1.646e+00	0.5289	26.0	0.39%	137.5	0.33%
Adof1(C2C2dof)/col-Adof1-DAP-Seq(GSE60143)/Homer	NRWAAAGYDV	1e0	-1.621e+00	0.5410	1117.0	16.90%	6942.9	16.50%
E2F(E2F)/Hela-CellCycle-Expression/Homer	TTSGCGCGAAAA	1e0	-1.607e+00	0.5471	52.0	0.79%	292.8	0.70%
ATHB7(Homeobox)/col-ATHB7-DAP-Seq(GSE60143)/Homer	AATGATTG	1e0	-1.575e+00	0.5631	169.0	2.56%	1008.2	2.40%
IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer	AGTTTCAKTTTC	1e0	-1.550e+00	0.5755	107.0	1.62%	628.8	1.49%
CRC(C2C2YABBY)/col-CRC-DAP-Seq(GSE60143)/Homer	TWATSATA	1e0	-1.550e+00	0.5755	308.0	4.66%	1872.2	4.45%
Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer	ANTTMRCASBNNNGTGYKAAN	1e0	-1.549e+00	0.5755	122.0	1.85%	720.2	1.71%
RAP21(AP2EREBP)/colamp-RAP21-DAP-Seq(GSE60143)/Homer	BCACCGACAHNN	1e0	-1.523e+00	0.5861	120.0	1.82%	709.9	1.69%
Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	RTCACSCCAY	1e0	-1.521e+00	0.5861	87.0	1.32%	507.9	1.21%
RBFox2(?)/Heart-RBFox2-CLIP-Seq(GSE57926)/Homer	TGCATGCA	1e0	-1.499e+00	0.5971	1039.0	15.72%	6467.2	15.37%
ATHB6(Homeobox)/Arabidopsis-HB6-ChIP-Seq(GSE80564)/Homer	CAATNATTBN	1e0	-1.498e+00	0.5971	193.0	2.92%	1161.8	2.76%
HDG1(Homeobox)/col100-HDG1-DAP-Seq(GSE60143)/Homer	DDYAATTAATGH	1e0	-1.488e+00	0.5998	169.0	2.56%	1013.6	2.41%
ANAC045(NAC)/col-ANAC045-DAP-Seq(GSE60143)/Homer	DNCKTVNNNNNNAMG	1e0	-1.480e+00	0.6032	859.0	12.99%	5335.3	12.68%
AT2G01818(PLATZ)/col-AT2G01818-DAP-Seq(GSE60143)/Homer	TCTAGAABSTTC	1e0	-1.472e+00	0.6064	39.0	0.59%	218.0	0.52%
HLH-1(bHLH)/cElegans-Embryo-HLH1-ChIP-Seq(modEncode)/Homer	RACAGCTGTTBH	1e0	-1.460e+00	0.6117	400.0	6.05%	2454.5	5.83%
ANAC094(NAC)/col-ANAC094-DAP-Seq(GSE60143)/Homer	DVCGTRNNNNNYACG	1e0	-1.430e+00	0.6284	602.0	9.11%	3724.4	8.85%
ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer	GAGSCCGAGC	1e0	-1.425e+00	0.6299	275.0	4.16%	1676.7	3.99%
At1g64620(C2C2dof)/colamp-At1g64620-DAP-Seq(GSE60143)/Homer	CACTTTTT	1e0	-1.423e+00	0.6299	599.0	9.06%	3706.8	8.81%
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	MAATCACTGC	1e0	-1.415e+00	0.6327	313.0	4.73%	1914.8	4.55%
GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	CRGCTGBNGNSNNSAGATAA	1e0	-1.408e+00	0.6351	47.0	0.71%	268.6	0.64%
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	TAATCCCN	1e0	-1.400e+00	0.6384	1667.0	25.22%	10452.5	24.85%
IDD2(C2H2)/colamp-IDD2-DAP-Seq(GSE60143)/Homer	HAVAAAAMGACAAAA	1e0	-1.400e+00	0.6384	34.0	0.51%	190.6	0.45%
ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	AGGAARCAGCTG	1e0	-1.400e+00	0.6384	35.0	0.53%	196.1	0.47%
OBP1(C2C2dof)/col-OBP1-DAP-Seq(GSE60143)/Homer	NHHACTTTWT	1e0	-1.393e+00	0.6384	1131.0	17.11%	7063.3	16.79%
NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	SARTGGAAAAWRTGAGTCAB	1e0	-1.382e+00	0.6427	50.0	0.76%	287.6	0.68%
HSFA6B(HSF)/colamp-HSFA6B-DAP-Seq(GSE60143)/Homer	NTTCTAGAANHTTCT	1e0	-1.367e+00	0.6513	126.0	1.91%	754.7	1.79%
ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer	SMCAGTCWGAKGGAGGAGGC	1e0	-1.365e+00	0.6513	38.0	0.57%	215.1	0.51%
ATHB33(ZFHD)/col-ATHB33-DAP-Seq(GSE60143)/Homer	NGTRATTAAK	1e0	-1.359e+00	0.6523	457.0	6.91%	2821.2	6.71%
HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer	RTACGTGC	1e0	-1.348e+00	0.6579	1122.0	16.97%	7013.7	16.67%
ATHB13(Homeobox)/col-ATHB13-DAP-Seq(GSE60143)/Homer	CAATAATT	1e0	-1.347e+00	0.6579	306.0	4.63%	1876.0	4.46%
TRP2(MYBrelated)/colamp-TRP2-DAP-Seq(GSE60143)/Homer	TAAACCCT	1e0	-1.346e+00	0.6579	59.0	0.89%	343.1	0.82%
ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	GGVTCTCGCGAGAAC	1e0	-1.337e+00	0.6599	65.0	0.98%	380.9	0.91%
CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	NTNATGCAAYMNNHTGMAAY	1e0	-1.302e+00	0.6814	53.0	0.80%	308.1	0.73%
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	NYTTCCWGGAAR	1e0	-1.295e+00	0.6841	331.0	5.01%	2037.8	4.84%
bHLH74(bHLH)/col-bHLH74-DAP-Seq(GSE60143)/Homer	DRATCACGTGAB	1e0	-1.288e+00	0.6874	231.0	3.49%	1412.4	3.36%
HDG7(HB)/col-HDG7-DAP-Seq(GSE60143)/Homer	WGCATTTAATGC	1e0	-1.287e+00	0.6874	57.0	0.86%	333.8	0.79%
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	GSCTGTCACTCA	1e0	-1.285e+00	0.6874	27.0	0.41%	151.6	0.36%
Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	NGCGTGGGCGGR	1e0	-1.283e+00	0.6874	179.0	2.71%	1088.8	2.59%
AT2G28810(C2C2dof)/colamp-AT2G28810-DAP-Seq(GSE60143)/Homer	VAAAAAGTWA	1e0	-1.256e+00	0.7018	905.0	13.69%	5656.0	13.44%
PHA-4(Forkhead)/cElegans-Embryos-PHA4-ChIP-Seq(modEncode)/Homer	KTGTTTGC	1e0	-1.256e+00	0.7018	1322.0	20.00%	8293.2	19.71%
HSF21(HSF)/col-HSF21-DAP-Seq(GSE60143)/Homer	CTTCTAGAAGMTTYW	1e0	-1.246e+00	0.7055	27.0	0.41%	152.4	0.36%
Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer	NTAATBNAATTA	1e0	-1.222e+00	0.7209	178.0	2.69%	1086.5	2.58%
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	GYMATAAAAH	1e0	-1.216e+00	0.7227	217.0	3.28%	1330.6	3.16%
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer	NWGGGTGTGGCY	1e0	-1.209e+00	0.7265	41.0	0.62%	238.5	0.57%
ATHB34(ZFHD)/colamp-ATHB34-DAP-Seq(GSE60143)/Homer	TRATTARS	1e0	-1.207e+00	0.7265	264.0	3.99%	1625.8	3.86%
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	ATTTTCCATT	1e0	-1.204e+00	0.7265	329.0	4.98%	2033.6	4.83%
At5g29000(G2like)/col-At5g29000-DAP-Seq(GSE60143)/Homer	RGAATATTCYHH	1e0	-1.193e+00	0.7321	66.0	1.00%	392.5	0.93%
bZIP44(bZIP)/colamp-bZIP44-DAP-Seq(GSE60143)/Homer	NDTGCCACGTCAGCH	1e0	-1.188e+00	0.7337	10.0	0.15%	52.9	0.13%
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	SCTGTCAMTCAN	1e0	-1.181e+00	0.7370	80.0	1.21%	480.0	1.14%
At2g03500(G2like)/col-At2g03500-DAP-Seq(GSE60143)/Homer	WWAGAATATTCT	1e0	-1.175e+00	0.7395	55.0	0.83%	325.5	0.77%
BPC6(BBRBPC)/col-BPC6-DAP-Seq(GSE60143)/Homer	YTYTCTCTCTCTCTA	1e0	-1.157e+00	0.7510	4.0	0.06%	18.1	0.04%
FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer	SCHTGTTTACAT	1e0	-1.157e+00	0.7510	203.0	3.07%	1247.8	2.97%
AIL7(AP2EREBP)/colamp-AIL7-DAP-Seq(GSE60143)/Homer	KCACRAWTYYCGAGG	1e0	-1.147e+00	0.7544	165.0	2.50%	1010.0	2.40%
Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	CGGTCACSCCAC	1e0	-1.147e+00	0.7544	66.0	1.00%	394.4	0.94%
n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	VRCCACGTGG	1e0	-1.125e+00	0.7674	527.0	7.97%	3288.5	7.82%
AT1G04880(ARID)/colamp-AT1G04880-DAP-Seq(GSE60143)/Homer	AAACTATATADTATA	1e0	-1.118e+00	0.7709	21.0	0.32%	119.6	0.28%
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	AGGTGHCAGACA	1e0	-1.109e+00	0.7758	57.0	0.86%	340.0	0.81%
ATHB24(ZFHD)/colamp-ATHB24-DAP-Seq(GSE60143)/Homer	TAATTAAS	1e0	-1.108e+00	0.7758	251.0	3.80%	1552.7	3.69%
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	RGGTCTCTAACY	1e0	-1.103e+00	0.7764	81.0	1.23%	489.3	1.16%
ZML1(C2C2gata)/colamp-ZML1-DAP-Seq(GSE60143)/Homer	ATCWYRACCGTTSRW	1e0	-1.097e+00	0.7797	6.0	0.09%	31.0	0.07%
ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer	MACCTTCYATGGCTCCCTAKTGCCY	1e0	-1.094e+00	0.7798	3.0	0.05%	13.4	0.03%
AtIDD11(C2H2)/colamp-AtIDD11-DAP-Seq(GSE60143)/Homer	TTTGTCGTTT	1e0	-1.093e+00	0.7798	101.0	1.53%	614.9	1.46%
ABF1/SacCer-Promoters/Homer	CGTRNAAARTGA	1e0	-1.073e+00	0.7920	160.0	2.42%	984.8	2.34%
TATA-box/SacCer-Promoters/Homer	BBHWTATATA	1e0	-1.073e+00	0.7920	117.0	1.77%	715.1	1.70%
p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer	NRRRCAWGTCCDGRCATGYY	1e0	-1.065e+00	0.7946	16.0	0.24%	90.9	0.22%
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	GKTAATGR	1e0	-1.048e+00	0.8063	948.0	14.34%	5961.8	14.17%
SRS7(SRS)/colamp-SRS7-DAP-Seq(GSE60143)/Homer	HATAGGTTTH	1e0	-1.044e+00	0.8075	1199.0	18.14%	7552.9	17.95%
Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	CVGTSCTCCC	1e0	-1.039e+00	0.8094	1553.0	23.49%	9798.8	23.29%
dof24(C2C2dof)/col-dof24-DAP-Seq(GSE60143)/Homer	TWMCTTTTTG	1e0	-1.023e+00	0.8206	830.0	12.55%	5218.3	12.40%
MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	RRCAGCTGYTSY	1e0	-1.015e+00	0.8250	802.0	12.13%	5042.5	11.99%
Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer	SCTGTCAVTCAV	1e0	-9.934e-01	0.8410	90.0	1.36%	551.2	1.31%
AT1G69570(C2C2dof)/col-AT1G69570-DAP-Seq(GSE60143)/Homer	WAAAAGTGHH	1e0	-9.756e-01	0.8539	454.0	6.87%	2846.3	6.77%
DEAR3(AP2EREBP)/colamp-DEAR3-DAP-Seq(GSE60143)/Homer	BCACCGACAWNNNNN	1e0	-9.642e-01	0.8616	190.0	2.87%	1181.1	2.81%
bHLH130(bHLH)/col-bHLH130-DAP-Seq(GSE60143)/Homer	GCAACTTG	1e0	-9.594e-01	0.8637	202.0	3.06%	1257.5	2.99%
ATHB25(ZFHD)/colamp-ATHB25-DAP-Seq(GSE60143)/Homer	TAATTAVB	1e0	-9.536e-01	0.8666	358.0	5.42%	2242.4	5.33%
Cbf1(bHLH)/Yeast-Cbf1-ChIP-Seq(GSE29506)/Homer	TCACGTGAYH	1e0	-9.519e-01	0.8666	173.0	2.62%	1076.0	2.56%
AT1G01250(AP2EREBP)/col-AT1G01250-DAP-Seq(GSE60143)/Homer	YCACCGACAHTW	1e0	-9.456e-01	0.8693	68.0	1.03%	416.5	0.99%
Unknown1(NR/Ini-like)/Drosophila-Promoters/Homer	MYGGTCACACTG	1e0	-9.383e-01	0.8736	78.0	1.18%	479.9	1.14%
AS2(LOBAS2)/col-AS2-DAP-Seq(GSE60143)/Homer	CCGDAAWWHMCGSCG	1e0	-9.369e-01	0.8736	202.0	3.06%	1259.7	2.99%
PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GCAGCCAAGCRTGACH	1e0	-9.330e-01	0.8740	294.0	4.45%	1840.2	4.37%
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	SSCMATWAAA	1e0	-9.303e-01	0.8742	255.0	3.86%	1594.6	3.79%
At5g62940(C2C2dof)/col-At5g62940-DAP-Seq(GSE60143)/Homer	WHWHHACTTTTT	1e0	-9.247e-01	0.8770	1296.0	19.60%	8191.5	19.47%
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	ACTGAAACCA	1e0	-9.194e-01	0.8795	174.0	2.63%	1084.0	2.58%
AARE(HLH)/mES-cMyc-ChIP-Seq/Homer	GATTGCATCA	1e0	-9.176e-01	0.8795	34.0	0.51%	205.9	0.49%
AT1G44830(AP2EREBP)/col-AT1G44830-DAP-Seq(GSE60143)/Homer	NCCACCGACA	1e0	-9.075e-01	0.8858	378.0	5.72%	2374.2	5.64%
AtHB32(ZFHD)/col200-AtHB32-DAP-Seq(GSE60143)/Homer	CGAATTAT	1e0	-9.050e-01	0.8859	374.0	5.66%	2349.8	5.59%
IDD5(C2H2)/colamp-IDD5-DAP-Seq(GSE60143)/Homer	TTTTGTCTTTTTBTK	1e0	-9.033e-01	0.8859	189.0	2.86%	1180.6	2.81%
Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer	TGTTKCCTAGCAACM	1e0	-8.979e-01	0.8881	744.0	11.25%	4694.1	11.16%
ATHB23(ZFHD)/col-ATHB23-DAP-Seq(GSE60143)/Homer	HTAATTARNN	1e0	-8.965e-01	0.8881	294.0	4.45%	1845.0	4.39%
ATHB18(Homeobox)/colamp-ATHB18-DAP-Seq(GSE60143)/Homer	YCAATSATTG	1e0	-8.728e-01	0.9063	43.0	0.65%	264.0	0.63%
Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	NTAATTDGCYAATTANNWWD	1e0	-8.683e-01	0.9083	4.0	0.06%	21.4	0.05%
MYB30(MYB)/colamp-MYB30-DAP-Seq(GSE60143)/Homer	AGGTAGTTGG	1e0	-8.574e-01	0.9161	371.0	5.61%	2336.4	5.55%
Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer	VCAKCTGGNNNCCAGMTGBN	1e0	-8.381e-01	0.9318	72.0	1.09%	447.1	1.06%
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	GGGGGGGG	1e0	-8.309e-01	0.9364	1320.0	19.97%	8364.9	19.88%
At1g76110(ARID)/colamp-At1g76110-DAP-Seq(GSE60143)/Homer	ATTTAATG	1e0	-8.295e-01	0.9364	214.0	3.24%	1345.2	3.20%
ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer	RGGGCACTAACY	1e0	-8.295e-01	0.9364	378.0	5.72%	2384.4	5.67%
AT3G25990(Trihelix)/colamp-AT3G25990-DAP-Seq(GSE60143)/Homer	TTAACCATAG	1e0	-8.131e-01	0.9465	203.0	3.07%	1277.7	3.04%
PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer	NGTGTTCAVTSAAGCGKAAA	1e0	-7.999e-01	0.9568	32.0	0.48%	197.0	0.47%
E-box/Drosophila-Promoters/Homer	AACAGCTGTTHN	1e0	-7.838e-01	0.9702	132.0	2.00%	830.8	1.97%
bZIP42(bZIP)/colamp-bZIP42-DAP-Seq(GSE60143)/Homer	GCCACGTCAGCA	1e0	-7.768e-01	0.9747	3.0	0.05%	16.4	0.04%
KANADI1(Myb)/Seedling-KAN1-ChIP-Seq(GSE48081)/Homer	ARGAATAWWN	1e0	-7.714e-01	0.9778	364.0	5.51%	2303.2	5.47%
Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCHGATTAC	1e0	-7.526e-01	0.9940	6.0	0.09%	35.5	0.08%
AT4G00250(GeBP)/col-AT4G00250-DAP-Seq(GSE60143)/Homer	WDTGGATAAKRT	1e0	-7.502e-01	0.9942	147.0	2.22%	928.4	2.21%
Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer	GCTATTTTTAGC	1e0	-7.498e-01	0.9942	68.0	1.03%	427.7	1.02%
AT5G66940(C2C2dof)/col-AT5G66940-DAP-Seq(GSE60143)/Homer	NNHACTTTWT	1e0	-7.314e-01	1.0000	751.0	11.36%	4769.5	11.34%
dof42(C2C2dof)/col-dof42-DAP-Seq(GSE60143)/Homer	AAAAAGGC	1e0	-7.233e-01	1.0000	219.0	3.31%	1388.3	3.30%
At1g19000(MYBrelated)/colamp-At1g19000-DAP-Seq(GSE60143)/Homer	WWTGGATAADDT	1e0	-7.215e-01	1.0000	210.0	3.18%	1331.5	3.17%
EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	GGYAGCAYDTGCTDCCCNNN	1e0	-7.147e-01	1.0000	10.0	0.15%	61.9	0.15%
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	HTTTCCCASG	1e0	-7.141e-01	1.0000	600.0	9.08%	3812.2	9.06%
ANAC103(NAC)/col-ANAC103-DAP-Seq(GSE60143)/Homer	AACTTGNWNWNCAAG	1e0	-7.132e-01	1.0000	101.0	1.53%	639.9	1.52%
AT5G02460(C2C2dof)/col-AT5G02460-DAP-Seq(GSE60143)/Homer	CHCCTTTT	1e0	-7.123e-01	1.0000	757.0	11.45%	4811.1	11.44%
FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer	TRTTTACTTW	1e0	-6.973e-01	1.0000	335.0	5.07%	2129.2	5.06%
SOC1(MADS)/Seedling-SOC1-ChIP-Seq(GSE45846)/Homer	TWCCAWWTWTGG	1e0	-6.888e-01	1.0000	93.0	1.41%	590.5	1.40%
AT4G26030(C2H2)/col-AT4G26030-DAP-Seq(GSE60143)/Homer	BYYACCWACY	1e0	-6.826e-01	1.0000	332.0	5.02%	2112.2	5.02%
ZIM(C2C2gata)/col-ZIM-DAP-Seq(GSE60143)/Homer	ATCSRACGGTYRAGA	1e0	-6.771e-01	1.0000	5.0	0.08%	30.4	0.07%
MYB96(MYB)/colamp-MYB96-DAP-Seq(GSE60143)/Homer	WGGTRGTTGG	1e0	-6.770e-01	1.0000	278.0	4.21%	1769.6	4.21%
ATHB5(HB)/colamp-ATHB5-DAP-Seq(GSE60143)/Homer	AATGATTG	1e0	-6.749e-01	1.0000	231.0	3.49%	1470.4	3.50%
HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	GCACGTACCC	1e0	-6.748e-01	1.0000	348.0	5.26%	2215.5	5.27%
AT3G12130(C3H)/colamp-AT3G12130-DAP-Seq(GSE60143)/Homer	TMACTTTTTV	1e0	-6.637e-01	1.0000	945.0	14.29%	6018.4	14.31%
ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer	AGAAATGACTTCCCT	1e0	-6.624e-01	1.0000	2.0	0.03%	11.3	0.03%
Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer	YTGWCADY	1e0	-6.610e-01	1.0000	1230.0	18.61%	7833.5	18.62%
ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer	AGTTTCASTTTC	1e0	-6.586e-01	1.0000	19.0	0.29%	120.1	0.29%
M1BP(Zf)/S2R+-M1BP-ChIP-Seq(GSE49842)/Homer	CAGTGTGACCGT	1e0	-6.510e-01	1.0000	101.0	1.53%	644.8	1.53%
GAGA-repeat/SacCer-Promoters/Homer	CTYTCTYTCTCTCTC	1e0	-6.471e-01	1.0000	1591.0	24.07%	10135.8	24.09%
Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	SAGATAAGRV	1e0	-6.418e-01	1.0000	191.0	2.89%	1219.4	2.90%
MYB51(MYB)/col-MYB51-DAP-Seq(GSE60143)/Homer	GGTAGGTG	1e0	-6.341e-01	1.0000	329.0	4.98%	2100.7	4.99%
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	ACATGCCCGGGCAT	1e0	-6.208e-01	1.0000	7.0	0.11%	44.7	0.11%
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	ADBTAATTAR	1e0	-6.073e-01	1.0000	609.0	9.21%	3890.9	9.25%
NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer	GGAAATTCCC	1e0	-6.021e-01	1.0000	21.0	0.32%	135.6	0.32%
SEP3(MADS)/Arabidoposis-Flower-Sep3-ChIP-Seq/Homer	CCAAAAAGGG	1e0	-5.989e-01	1.0000	375.0	5.67%	2399.8	5.70%
VND6(NAC)/col-VND6-DAP-Seq(GSE60143)/Homer	DCTTNHTTTTYAMGY	1e0	-5.949e-01	1.0000	402.0	6.08%	2572.9	6.12%
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	RTTTCTNAGAAA	1e0	-5.941e-01	1.0000	84.0	1.27%	540.8	1.29%
PQM-1(?)/cElegans-L3-ChIP-Seq(modEncode)/Homer	ACTGATAAGA	1e0	-5.839e-01	1.0000	99.0	1.50%	637.6	1.52%
DREF/Drosophila-Promoters/Homer	AVYTATCGATAD	1e0	-5.759e-01	1.0000	2.0	0.03%	12.6	0.03%
ZML2(C2C2gata)/col-ZML2-DAP-Seq(GSE60143)/Homer	CATCATCATC	1e0	-5.655e-01	1.0000	69.0	1.04%	446.3	1.06%
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer	GYCATCMATCAT	1e0	-5.635e-01	1.0000	26.0	0.39%	169.8	0.40%
DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer	YDGHTACAWTGTADC	1e0	-5.633e-01	1.0000	39.0	0.59%	253.3	0.60%
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	HWWGTCAGCAWWTTT	1e0	-5.625e-01	1.0000	92.0	1.39%	594.1	1.41%
TBP3(MYBrelated)/col-TBP3-DAP-Seq(GSE60143)/Homer	VYTAGGGCAN	1e0	-5.608e-01	1.0000	209.0	3.16%	1344.1	3.19%
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	CCWGGAATGY	1e0	-5.507e-01	1.0000	268.0	4.05%	1723.3	4.10%
AT5G60130(ABI3VP1)/col-AT5G60130-DAP-Seq(GSE60143)/Homer	WTTYTAAGVAAA	1e0	-5.449e-01	1.0000	634.0	9.59%	4063.3	9.66%
IDD7(C2H2)/col-IDD7-DAP-Seq(GSE60143)/Homer	TTTGTCKTTTTN	1e0	-5.419e-01	1.0000	104.0	1.57%	673.8	1.60%
Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	BBCTTATCTS	1e0	-5.399e-01	1.0000	207.0	3.13%	1334.9	3.17%
MYB58(MYB)/colamp-MYB58-DAP-Seq(GSE60143)/Homer	YYYACCWACC	1e0	-5.389e-01	1.0000	321.0	4.86%	2064.0	4.91%
HSF3(HSF)/colamp-HSF3-DAP-Seq(GSE60143)/Homer	NTTCTAGAAKCTTCT	1e0	-5.316e-01	1.0000	241.0	3.65%	1553.9	3.69%
LOB(LOBAS2)/col-LOB-DAP-Seq(GSE60143)/Homer	CGCCGKAWWTTHCGS	1e0	-5.282e-01	1.0000	450.0	6.81%	2891.7	6.87%
bZIP69(bZIP)/col-bZIP69-DAP-Seq(GSE60143)/Homer	GACAGCTGKCAW	1e0	-5.265e-01	1.0000	60.0	0.91%	392.0	0.93%
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	AWWNTGCTGAGTCAT	1e0	-5.237e-01	1.0000	13.0	0.20%	86.8	0.21%
Replumless(BLH)/Arabidopsis-RPL.GFP-ChIP-Seq(GSE78727)/Homer	HGTCWHATCA	1e0	-5.214e-01	1.0000	356.0	5.38%	2291.6	5.45%
Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer	NNYTAATTAR	1e0	-5.147e-01	1.0000	413.0	6.25%	2657.8	6.32%
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	RSCACTYRAG	1e0	-5.092e-01	1.0000	1158.0	17.52%	7417.0	17.63%
CUC2(NAC)/colamp-CUC2-DAP-Seq(GSE60143)/Homer	TRCKTGTNNNWCAMG	1e0	-5.072e-01	1.0000	103.0	1.56%	670.1	1.59%
MYB62(MYB)/colamp-MYB62-DAP-Seq(GSE60143)/Homer	NTACCTAACT	1e0	-5.062e-01	1.0000	469.0	7.09%	3017.7	7.17%
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	BAACAGCTGT	1e0	-5.057e-01	1.0000	542.0	8.20%	3484.7	8.28%
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	NYYTGTTTACHN	1e0	-5.022e-01	1.0000	136.0	2.06%	883.1	2.10%
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	RRSCACTYAA	1e0	-5.020e-01	1.0000	824.0	12.46%	5287.7	12.57%
COG1(C2C2dof)/col-COG1-DAP-Seq(GSE60143)/Homer	DAAAAAGTGA	1e0	-4.991e-01	1.0000	508.0	7.68%	3269.0	7.77%
ATHB40(HB)/col-ATHB40-DAP-Seq(GSE60143)/Homer	HCAATWATTG	1e0	-4.984e-01	1.0000	198.0	3.00%	1282.0	3.05%
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer	ACWTCAAAGG	1e0	-4.930e-01	1.0000	25.0	0.38%	166.9	0.40%
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	AGGTGTGAAM	1e0	-4.906e-01	1.0000	347.0	5.25%	2239.4	5.32%
Unknown4/Drosophila-Promoters/Homer	AAAAATACCRMA	1e0	-4.902e-01	1.0000	40.0	0.61%	264.2	0.63%
MYB55(MYB)/colamp-MYB55-DAP-Seq(GSE60143)/Homer	YACCWAMC	1e0	-4.878e-01	1.0000	385.0	5.82%	2483.4	5.90%
MYB99(MYB)/colamp-MYB99-DAP-Seq(GSE60143)/Homer	GGTAGGTG	1e0	-4.873e-01	1.0000	326.0	4.93%	2105.2	5.00%
ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer	CCTCATGGTGYCYTWYTCCCTTGTG	1e0	-4.820e-01	1.0000	5.0	0.08%	34.9	0.08%
bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer	NAGTTTCABTHTGACTNW	1e0	-4.709e-01	1.0000	110.0	1.66%	719.0	1.71%
MYB107(MYB)/col-MYB107-DAP-Seq(GSE60143)/Homer	RGTWGGTRRR	1e0	-4.675e-01	1.0000	550.0	8.32%	3544.2	8.42%
SND2(NAC)/colamp-SND2-DAP-Seq(GSE60143)/Homer	CTTVWNNNWBAAGNW	1e0	-4.636e-01	1.0000	191.0	2.89%	1242.3	2.95%
HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer	RTTATGYAAB	1e0	-4.621e-01	1.0000	291.0	4.40%	1885.8	4.48%
CBF4(AP2EREBP)/colamp-CBF4-DAP-Seq(GSE60143)/Homer	NRCCGACDWNNNNNN	1e0	-4.620e-01	1.0000	448.0	6.78%	2892.7	6.88%
Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer	YTAATTRAWWCCAGATGT	1e0	-4.570e-01	1.0000	51.0	0.77%	338.6	0.80%
RKD2(RWPRK)/colamp-RKD2-DAP-Seq(GSE60143)/Homer	GACKTTTCRDCTTCC	1e0	-4.446e-01	1.0000	244.0	3.69%	1586.4	3.77%
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	TGATTRATGGCY	1e0	-4.437e-01	1.0000	49.0	0.74%	326.8	0.78%
Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	GGTGYTGACAGS	1e0	-4.421e-01	1.0000	133.0	2.01%	871.1	2.07%
ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer	GNCTGTASTRNTGBCTCHTT	1e0	-4.287e-01	1.0000	12.0	0.18%	83.8	0.20%
Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer	GCTATTTTTGGM	1e0	-4.277e-01	1.0000	274.0	4.14%	1782.3	4.24%
REM19(REM)/colamp-REM19-DAP-Seq(GSE60143)/Homer	AAAAAAAA	1e0	-4.254e-01	1.0000	71.0	1.07%	471.9	1.12%
ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	RGRACASNSTGTYCYB	1e0	-4.197e-01	1.0000	106.0	1.60%	699.8	1.66%
ANAC071(NAC)/col-ANAC071-DAP-Seq(GSE60143)/Homer	DNCKTNDNNNHNAAG	1e0	-4.176e-01	1.0000	272.0	4.11%	1771.2	4.21%
GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATSTNDNNDSAGATAASN	1e0	-4.114e-01	1.0000	18.0	0.27%	124.0	0.29%
Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer	WWATRTAAACAN	1e0	-4.083e-01	1.0000	268.0	4.05%	1747.1	4.15%
DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer	TWGHWACAWTGTWDC	1e0	-4.068e-01	1.0000	49.0	0.74%	329.2	0.78%
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WAAGTAAACA	1e0	-4.054e-01	1.0000	382.0	5.78%	2481.8	5.90%
ANAC083(NAC)/col-ANAC083-DAP-Seq(GSE60143)/Homer	CKTRWNNNWYAMGTA	1e0	-4.016e-01	1.0000	236.0	3.57%	1542.2	3.67%
At3g45610(C2C2dof)/col-At3g45610-DAP-Seq(GSE60143)/Homer	TWACTTTTTS	1e0	-4.014e-01	1.0000	534.0	8.08%	3458.6	8.22%
ANL2(HB)/col-ANL2-DAP-Seq(GSE60143)/Homer	CATTAATTGC	1e0	-3.955e-01	1.0000	179.0	2.71%	1175.1	2.79%
bHLH122(bHLH)/col100-bHLH122-DAP-Seq(GSE60143)/Homer	NDDCAASTTGHHNWW	1e0	-3.916e-01	1.0000	221.0	3.34%	1447.9	3.44%
PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	GGAAGTGAAAST	1e0	-3.881e-01	1.0000	55.0	0.83%	370.3	0.88%
MYB67(MYB)/col-MYB67-DAP-Seq(GSE60143)/Homer	YYYACCTAAC	1e0	-3.858e-01	1.0000	319.0	4.83%	2080.2	4.94%
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	NATTTCCNGGAAAT	1e0	-3.857e-01	1.0000	71.0	1.07%	475.8	1.13%
TATA-box/Drosophila-Promoters/Homer	CTATAAAAGCSV	1e0	-3.829e-01	1.0000	23.0	0.35%	159.5	0.38%
At5g08520(MYBrelated)/colamp-At5g08520-DAP-Seq(GSE60143)/Homer	ADBSTTATCY	1e0	-3.781e-01	1.0000	313.0	4.73%	2043.3	4.86%
At1g74840(MYBrelated)/col100-At1g74840-DAP-Seq(GSE60143)/Homer	YHTTATCCAWWT	1e0	-3.767e-01	1.0000	181.0	2.74%	1191.2	2.83%
p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	NNDRCATGYCYNRRCATGYH	1e0	-3.759e-01	1.0000	127.0	1.92%	841.3	2.00%
IDD4(C2H2)/col-IDD4-DAP-Seq(GSE60143)/Homer	TTTGTCTTTWTB	1e0	-3.756e-01	1.0000	243.0	3.68%	1592.4	3.79%
FHY3(FAR1)/Arabidopsis-FHY3-ChIP-Seq(GSE30711)/Homer	HHCACGCGCBTN	1e0	-3.748e-01	1.0000	428.0	6.47%	2784.2	6.62%
bHLH80(bHLH)/col-bHLH80-DAP-Seq(GSE60143)/Homer	NNNNDCAASTTGHNN	1e0	-3.675e-01	1.0000	257.0	3.89%	1684.4	4.00%
Unknown2/Drosophila-Promoters/Homer	CATCMCTA	1e0	-3.669e-01	1.0000	805.0	12.18%	5206.1	12.37%
GEI-11(Myb?)/cElegans-L4-GEI11-ChIP-Seq(modEncode)/Homer	CCGACAYYTYACGGG	1e0	-3.652e-01	1.0000	53.0	0.80%	359.3	0.85%
dof45(C2C2dof)/col-dof45-DAP-Seq(GSE60143)/Homer	NVAWAAAGTN	1e0	-3.652e-01	1.0000	929.0	14.05%	6001.9	14.27%
DEAR5(AP2EREBP)/col-DEAR5-DAP-Seq(GSE60143)/Homer	NDWTGTCGGTGRWDN	1e0	-3.646e-01	1.0000	112.0	1.69%	745.3	1.77%
At5g66730(C2H2)/colamp-At5g66730-DAP-Seq(GSE60143)/Homer	TTTGTCKTTTTK	1e0	-3.609e-01	1.0000	68.0	1.03%	458.3	1.09%
ATHB6(Homeobox)/col-ATHB6-DAP-Seq(GSE60143)/Homer	AATGATTG	1e0	-3.608e-01	1.0000	309.0	4.67%	2021.6	4.81%
NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer	GGGGGAATCCCC	1e0	-3.586e-01	1.0000	97.0	1.47%	648.9	1.54%
AT3G51470(DBP)/col-AT3G51470-DAP-Seq(GSE60143)/Homer	TTWHGGTGCACC	1e0	-3.581e-01	1.0000	684.0	10.35%	4433.9	10.54%
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	GTCATGCHTGRCTGS	1e0	-3.569e-01	1.0000	174.0	2.63%	1149.5	2.73%
MYB17(MYB)/colamp-MYB17-DAP-Seq(GSE60143)/Homer	GGTAGGTGRG	1e0	-3.565e-01	1.0000	178.0	2.69%	1175.7	2.79%
VIP1(bZIP)/col-VIP1-DAP-Seq(GSE60143)/Homer	NTTGACAGCTGTCAN	1e0	-3.419e-01	1.0000	82.0	1.24%	552.5	1.31%
Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer	CCCCTCCCCCAC	1e0	-3.407e-01	1.0000	54.0	0.82%	368.0	0.87%
Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer	YCTTATCTBN	1e0	-3.393e-01	1.0000	281.0	4.25%	1845.8	4.39%
AT1G19040(NAC)/col-AT1G19040-DAP-Seq(GSE60143)/Homer	CTTGNDNHNCAAGYW	1e0	-3.367e-01	1.0000	30.0	0.45%	209.8	0.50%
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	CYTGTTTACWYW	1e0	-3.339e-01	1.0000	257.0	3.89%	1691.5	4.02%
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	GCTGASTCAGCA	1e0	-3.295e-01	1.0000	74.0	1.12%	501.5	1.19%
Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	YTAATYNRATTA	1e0	-3.253e-01	1.0000	98.0	1.48%	659.3	1.57%
ATY19(MYB)/col-ATY19-DAP-Seq(GSE60143)/Homer	YYCACCWACCAT	1e0	-3.249e-01	1.0000	234.0	3.54%	1544.7	3.67%
LMI1(HB)/colamp-LMI1-DAP-Seq(GSE60143)/Homer	AATTATTG	1e0	-3.230e-01	1.0000	182.0	2.75%	1207.2	2.87%
BBX31(Orphan)/col-BBX31-DAP-Seq(GSE60143)/Homer	NAAAAAGTDA	1e0	-3.171e-01	1.0000	575.0	8.70%	3746.7	8.91%
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer	CYAAAAATAG	1e0	-3.169e-01	1.0000	131.0	1.98%	876.9	2.08%
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer	WGGGGATTTCCC	1e0	-3.075e-01	1.0000	202.0	3.06%	1341.0	3.19%
CHR(?)/Hela-CellCycle-Expression/Homer	SRGTTTCAAA	1e0	-3.046e-01	1.0000	177.0	2.68%	1178.2	2.80%
MYB93(MYB)/colamp-MYB93-DAP-Seq(GSE60143)/Homer	GGTAGGTGRD	1e0	-3.031e-01	1.0000	370.0	5.60%	2429.8	5.78%
ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer	AAGGKGRCGCAGGCA	1e0	-3.006e-01	1.0000	90.0	1.36%	610.8	1.45%
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer	AAYTAGGTCA	1e0	-2.998e-01	1.0000	30.0	0.45%	212.5	0.51%
CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	ATTGCGCAAC	1e0	-2.933e-01	1.0000	216.0	3.27%	1434.1	3.41%
ANAC092(NAC)/colamp-ANAC092-DAP-Seq(GSE60143)/Homer	WRCKTGWNNNWCAMG	1e0	-2.927e-01	1.0000	129.0	1.95%	868.0	2.06%
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	DCYAAAAATAGM	1e0	-2.880e-01	1.0000	133.0	2.01%	894.9	2.13%
HAT5(Homeobox)/colamp-HAT5-DAP-Seq(GSE60143)/Homer	DCAATWATTG	1e0	-2.855e-01	1.0000	31.0	0.47%	220.5	0.52%
At5g05790(MYBrelated)/col-At5g05790-DAP-Seq(GSE60143)/Homer	AYCTTATC	1e0	-2.820e-01	1.0000	249.0	3.77%	1651.8	3.93%
ELT-3(Gata)/cElegans-L1-ELT3-ChIP-Seq(modEncode)/Homer	AWTGATAAGA	1e0	-2.818e-01	1.0000	99.0	1.50%	672.5	1.60%
PTF1(TCP)/colamp-PTF1-DAP-Seq(GSE60143)/Homer	RDDGGGACCACA	1e0	-2.800e-01	1.0000	33.0	0.50%	235.0	0.56%
AT3G58630(Trihelix)/col-AT3G58630-DAP-Seq(GSE60143)/Homer	TCTCCGGCGA	1e0	-2.789e-01	1.0000	194.0	2.93%	1294.2	3.08%
AT4G27900(C2C2COlike)/col-AT4G27900-DAP-Seq(GSE60143)/Homer	TCTCVACCGTTSATT	1e0	-2.785e-01	1.0000	1.0	0.02%	9.2	0.02%
Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer	AAGGTGTKAA	1e0	-2.774e-01	1.0000	520.0	7.87%	3405.3	8.09%
ANAC070(NAC)/colamp-ANAC070-DAP-Seq(GSE60143)/Homer	CTTRHDNHNBAAGHW	1e0	-2.762e-01	1.0000	341.0	5.16%	2249.6	5.35%
At3g11280(MYBrelated)/col-At3g11280-DAP-Seq(GSE60143)/Homer	GATAAGRT	1e0	-2.759e-01	1.0000	232.0	3.51%	1543.0	3.67%
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer	YCWGGAATGY	1e0	-2.705e-01	1.0000	179.0	2.71%	1199.0	2.85%
FAR1(FAR1)/col-FAR1-DAP-Seq(GSE60143)/Homer	TKNNNYYCACGCGCY	1e0	-2.691e-01	1.0000	169.0	2.56%	1133.6	2.69%
SPCH(bHLH)/Seedling-SPCH-ChIP-Seq(GSE57497)/Homer	WNBCACGTGA	1e0	-2.637e-01	1.0000	630.0	9.53%	4119.8	9.79%
GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NAGATWNBNATCTNN	1e0	-2.627e-01	1.0000	20.0	0.30%	147.4	0.35%
Unknown4/Arabidopsis-Promoters/Homer	CKTCKTCTTY	1e0	-2.602e-01	1.0000	463.0	7.00%	3043.5	7.23%
SGR5(C2H2)/colamp-SGR5-DAP-Seq(GSE60143)/Homer	TTTGTCTTTTTT	1e0	-2.584e-01	1.0000	191.0	2.89%	1279.3	3.04%
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	GGCCATAAATCA	1e0	-2.564e-01	1.0000	213.0	3.22%	1423.9	3.38%
EGL-5(Homeobox)/cElegans-L3-EGL5-ChIP-Seq(modEncode)/Homer	ATTTAATGGG	1e0	-2.505e-01	1.0000	460.0	6.96%	3027.5	7.20%
GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	VAGRACAKWCTGTYC	1e0	-2.502e-01	1.0000	84.0	1.27%	578.2	1.37%
ASHR1(ND)/col-ASHR1-DAP-Seq(GSE60143)/Homer	NTGGTGAN	1e0	-2.501e-01	1.0000	490.0	7.41%	3221.0	7.66%
ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer	GTGGGCCCCA	1e0	-2.461e-01	1.0000	72.0	1.09%	499.3	1.19%
AT2G33550(Trihelix)/colamp-AT2G33550-DAP-Seq(GSE60143)/Homer	TTTAAGGGCAYTTTT	1e0	-2.445e-01	1.0000	624.0	9.44%	4088.6	9.72%
IBL1(bHLH)/Seedling-IBL1-ChIP-Seq(GSE51120)/Homer	CACGTGCC	1e0	-2.424e-01	1.0000	1795.0	27.15%	11602.5	27.58%
FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	WAAGTAAACA	1e0	-2.355e-01	1.0000	302.0	4.57%	2008.1	4.77%
DEL1(E2FDP)/colamp-DEL1-DAP-Seq(GSE60143)/Homer	TTCCCGCCAA	1e0	-2.328e-01	1.0000	1.0	0.02%	10.3	0.02%
KAN2(G2like)/colamp-KAN2-DAP-Seq(GSE60143)/Homer	ATATTCTY	1e0	-2.304e-01	1.0000	384.0	5.81%	2542.7	6.04%
AT5G45580(G2like)/colamp-AT5G45580-DAP-Seq(GSE60143)/Homer	ADRGAATCTH	1e0	-2.289e-01	1.0000	435.0	6.58%	2873.7	6.83%
AGL25(MADS)/colamp-AGL25-DAP-Seq(GSE60143)/Homer	TTTCCATWTWTGGAA	1e0	-2.209e-01	1.0000	11.0	0.17%	87.3	0.21%
ANAC020(NAC)/col-ANAC020-DAP-Seq(GSE60143)/Homer	DVCKTGHNNNDCAAG	1e0	-2.206e-01	1.0000	187.0	2.83%	1262.6	3.00%
TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer	CCWGGAATGY	1e0	-2.204e-01	1.0000	141.0	2.13%	960.3	2.28%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	RGGTCADNNAGAGGTCAV	1e0	-2.186e-01	1.0000	7.0	0.11%	58.3	0.14%
FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer	WWTRTAAACAVG	1e0	-2.169e-01	1.0000	235.0	3.55%	1577.8	3.75%
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	NRAACCRGTTYRAACCRGYT	1e0	-2.168e-01	1.0000	50.0	0.76%	356.7	0.85%
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	YCATYAATCA	1e0	-2.145e-01	1.0000	264.0	3.99%	1767.5	4.20%
Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer	BTBRAGTGSN	1e0	-2.143e-01	1.0000	775.0	11.72%	5075.8	12.06%
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	KGTTGCCATGGCAA	1e0	-2.121e-01	1.0000	113.0	1.71%	777.0	1.85%
Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer	ACTYKNATTCGTGNTACTTC	1e0	-2.039e-01	1.0000	16.0	0.24%	124.6	0.30%
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	SCCTAGCAACAG	1e0	-2.032e-01	1.0000	141.0	2.13%	964.6	2.29%
NST1(NAC)/colamp-NST1-DAP-Seq(GSE60143)/Homer	WRCTTRWWNWWYAAG	1e0	-2.014e-01	1.0000	245.0	3.71%	1647.7	3.92%
ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer	TGGGGAAGGGCM	1e0	-1.996e-01	1.0000	547.0	8.27%	3610.4	8.58%
O2(bZIP)/Corn-O2-ChIP-Seq(GSE63991)/Homer	GCTGACGTGGCA	1e0	-1.995e-01	1.0000	104.0	1.57%	720.8	1.71%
AGL63(MADS)/col-AGL63-DAP-Seq(GSE60143)/Homer	TTCCAAWWWTGG	1e0	-1.966e-01	1.0000	222.0	3.36%	1498.6	3.56%
ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer	YTKGATAHAGTATTCTWGGTNGGCA	1e0	-1.939e-01	1.0000	17.0	0.26%	132.7	0.32%
SVP(MADS)/col-SVP-DAP-Seq(GSE60143)/Homer	ANTTWCCHAATTTGG	1e0	-1.933e-01	1.0000	116.0	1.75%	801.5	1.91%
ANAC075(NAC)/col-ANAC075-DAP-Seq(GSE60143)/Homer	CTTSWWNWWSAAGYT	1e0	-1.920e-01	1.0000	100.0	1.51%	695.8	1.65%
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	VBSYGTCTGG	1e0	-1.915e-01	1.0000	782.0	11.83%	5132.7	12.20%
SND3(NAC)/col-SND3-DAP-Seq(GSE60143)/Homer	CTTNHNNNDNAAGNH	1e0	-1.871e-01	1.0000	206.0	3.12%	1396.5	3.32%
dof43(C2C2dof)/colamp-dof43-DAP-Seq(GSE60143)/Homer	NAAAAAGTDA	1e0	-1.865e-01	1.0000	505.0	7.64%	3344.9	7.95%
AT3G52440(C2C2dof)/colamp-AT3G52440-DAP-Seq(GSE60143)/Homer	DTHACTTTTT	1e0	-1.863e-01	1.0000	838.0	12.68%	5496.0	13.06%
Unknown2/Arabidopsis-Promoters/Homer	AAACGACGTCGTTTT	1e0	-1.829e-01	1.0000	3.0	0.05%	29.2	0.07%
CUC3(NAC)/col-CUC3-DAP-Seq(GSE60143)/Homer	TRCKTGWNNNACAMG	1e0	-1.783e-01	1.0000	94.0	1.42%	658.5	1.57%
VND1(NAC)/col-VND1-DAP-Seq(GSE60143)/Homer	CTTRWDNHWYAAGYW	1e0	-1.781e-01	1.0000	224.0	3.39%	1517.5	3.61%
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	GGTTGCCATGGCAA	1e0	-1.776e-01	1.0000	50.0	0.76%	362.4	0.86%
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	AAGCACTTAA	1e0	-1.762e-01	1.0000	1021.0	15.44%	6681.3	15.88%
AT5G63260(C3H)/col-AT5G63260-DAP-Seq(GSE60143)/Homer	RAAAAAGTRA	1e0	-1.744e-01	1.0000	858.0	12.98%	5632.1	13.39%
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer	TGACCTTTNCNT	1e0	-1.717e-01	1.0000	37.0	0.56%	274.7	0.65%
GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer	NRGVACABNVTGTYCY	1e0	-1.686e-01	1.0000	62.0	0.94%	445.5	1.06%
SeqBias: CA-repeat	CACACACACA	1e0	-1.682e-01	1.0000	2462.0	37.24%	15919.9	37.84%
Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer	TTRAGTGSYK	1e0	-1.682e-01	1.0000	834.0	12.62%	5481.7	13.03%
c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer	VCCACGTG	1e0	-1.674e-01	1.0000	579.0	8.76%	3834.0	9.11%
ANAC013(NAC)/col-ANAC013-DAP-Seq(GSE60143)/Homer	CTTGNNNNNCAAGNA	1e0	-1.604e-01	1.0000	125.0	1.89%	869.3	2.07%
AGL16(MADS)/col-AGL16-DAP-Seq(GSE60143)/Homer	TWCCHWATWDGGAAA	1e0	-1.593e-01	1.0000	20.0	0.30%	157.7	0.37%
TCP17(TCP)/col-TCP17-DAP-Seq(GSE60143)/Homer	GTGGTCCCCA	1e0	-1.590e-01	1.0000	11.0	0.17%	92.2	0.22%
 Ik-1	NHTTGGGAATRCC	1e0	-1.571e-01	1.0000	6611.0	100.00%	42070.6	100.00%
NTM1(NAC)/col-NTM1-DAP-Seq(GSE60143)/Homer	ACTTRTARAASAAGT	1e0	-1.565e-01	1.0000	131.0	1.98%	910.7	2.16%
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	CTGTCTGG	1e0	-1.561e-01	1.0000	780.0	11.80%	5140.4	12.22%
bZIP16(bZIP)/colamp-bZIP16-DAP-Seq(GSE60143)/Homer	TGCCACGTGD	1e0	-1.561e-01	1.0000	148.0	2.24%	1023.0	2.43%
OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	ATGAATATTCATGAG	1e0	-1.513e-01	1.0000	2.0	0.03%	22.2	0.05%
bZIP28(bZIP)/col-bZIP28-DAP-Seq(GSE60143)/Homer	TGCCACGTSABH	1e0	-1.503e-01	1.0000	139.0	2.10%	965.2	2.29%
At3g12730(G2like)/colamp-At3g12730-DAP-Seq(GSE60143)/Homer	AAGATTCT	1e0	-1.498e-01	1.0000	396.0	5.99%	2653.4	6.31%
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	ATGCCCTGAGGC	1e0	-1.472e-01	1.0000	731.0	11.06%	4829.2	11.48%
GBF6(bZIP)/colamp-GBF6-DAP-Seq(GSE60143)/Homer	WWTGMCACGTCABCW	1e0	-1.465e-01	1.0000	89.0	1.35%	632.8	1.50%
Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer	TGACANARRCCAGRC	1e0	-1.451e-01	1.0000	135.0	2.04%	940.3	2.23%
AT5G22990(C2H2)/col-AT5G22990-DAP-Seq(GSE60143)/Homer	WCGAHDTCGWHN	1e0	-1.421e-01	1.0000	53.0	0.80%	389.5	0.93%
At5g58900(MYBrelated)/colamp-At5g58900-DAP-Seq(GSE60143)/Homer	WWWTYTTATCTWWWW	1e0	-1.411e-01	1.0000	365.0	5.52%	2455.3	5.84%
HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	TACGTGCV	1e0	-1.410e-01	1.0000	256.0	3.87%	1741.7	4.14%
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	HTGCTGAGTCAT	1e0	-1.389e-01	1.0000	11.0	0.17%	94.1	0.22%
OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAACAATG	1e0	-1.379e-01	1.0000	44.0	0.67%	328.5	0.78%
ANAC011(NAC)/col-ANAC011-DAP-Seq(GSE60143)/Homer	TDCTTGYRNNDCAAG	1e0	-1.355e-01	1.0000	96.0	1.45%	682.5	1.62%
Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	TGCTGAGTCA	1e0	-1.351e-01	1.0000	49.0	0.74%	363.3	0.86%
WUS1(Homeobox)/colamp-WUS1-DAP-Seq(GSE60143)/Homer	CAWTCATTCA	1e0	-1.314e-01	1.0000	89.0	1.35%	636.7	1.51%
Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer	DGTAAACA	1e0	-1.309e-01	1.0000	213.0	3.22%	1462.6	3.48%
SMB(NAC)/colamp-SMB-DAP-Seq(GSE60143)/Homer	CTTVNNNNDBAAGHW	1e0	-1.277e-01	1.0000	277.0	4.19%	1885.3	4.48%
MYB61(MYB)/colamp-MYB61-DAP-Seq(GSE60143)/Homer	HCYACCTACC	1e0	-1.249e-01	1.0000	499.0	7.55%	3338.3	7.94%
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer	CCATATATGGNM	1e0	-1.249e-01	1.0000	75.0	1.13%	543.1	1.29%
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	KTGACCTTGA	1e0	-1.241e-01	1.0000	181.0	2.74%	1253.3	2.98%
MYB94(MYB)/col-MYB94-DAP-Seq(GSE60143)/Homer	WGGTRGTTGGKA	1e0	-1.184e-01	1.0000	104.0	1.57%	741.7	1.76%
WRKY30(WRKY)/colamp-WRKY30-DAP-Seq(GSE60143)/Homer	CGTTGACTTN	1e0	-1.169e-01	1.0000	49.0	0.74%	367.5	0.87%
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	TAATTAGN	1e0	-1.157e-01	1.0000	371.0	5.61%	2508.6	5.96%
Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	NBWGATAAGR	1e0	-1.145e-01	1.0000	309.0	4.67%	2102.7	5.00%
ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	AGGCCTAG	1e0	-1.137e-01	1.0000	1195.0	18.08%	7851.6	18.66%
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	NNNCTTTCCAGGAAA	1e0	-1.127e-01	1.0000	386.0	5.84%	2608.1	6.20%
VND2(NAC)/col-VND2-DAP-Seq(GSE60143)/Homer	DNCKTNNNNNNNAAG	1e0	-1.088e-01	1.0000	276.0	4.17%	1888.1	4.49%
Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCAATTA	1e0	-1.081e-01	1.0000	19.0	0.29%	157.7	0.37%
NGA4(ABI3VP1)/col-NGA4-DAP-Seq(GSE60143)/Homer	TKNTCAGGTG	1e0	-1.078e-01	1.0000	1440.0	21.78%	9434.4	22.43%
bZIP68(bZIP)/col-bZIP68-DAP-Seq(GSE60143)/Homer	WGCCACGTGK	1e0	-1.077e-01	1.0000	178.0	2.69%	1240.2	2.95%
At2g41835(C2H2)/col-At2g41835-DAP-Seq(GSE60143)/Homer	TTTGAAAA	1e0	-1.042e-01	1.0000	133.0	2.01%	941.7	2.24%
AT1G49560(G2like)/colamp-AT1G49560-DAP-Seq(GSE60143)/Homer	GAWTCTNWDA	1e0	-1.033e-01	1.0000	317.0	4.80%	2161.5	5.14%
bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	KCACGTGMCN	1e0	-1.029e-01	1.0000	244.0	3.69%	1680.1	3.99%
FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	AGTAAACAAAAAAGAACAND	1e0	-1.006e-01	1.0000	10.0	0.15%	91.1	0.22%
ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer	NGNTCTAGAACCNGV	1e0	-1.002e-01	1.0000	70.0	1.06%	516.5	1.23%
TOD6?/SacCer-Promoters/Homer	GCGATGAGMT	1e0	-9.972e-02	1.0000	106.0	1.60%	761.3	1.81%
ATHB21(HB)/colamp-ATHB21-DAP-Seq(GSE60143)/Homer	YCAATWAT	1e0	-9.959e-02	1.0000	102.0	1.54%	734.6	1.75%
AGL13(MADS)/col-AGL13-DAP-Seq(GSE60143)/Homer	TWCCAWWTWTGGWAA	1e0	-9.685e-02	1.0000	7.0	0.11%	68.0	0.16%
WRKY15(WRKY)/col-WRKY15-DAP-Seq(GSE60143)/Homer	VGTTGACTWW	1e0	-9.635e-02	1.0000	179.0	2.71%	1252.5	2.98%
MYB40(MYB)/col-MYB40-DAP-Seq(GSE60143)/Homer	TGGTAGGTRARA	1e0	-9.634e-02	1.0000	89.0	1.35%	647.7	1.54%
GAGA-repeat/Arabidopsis-Promoters/Homer	CTCTCTCTCY	1e0	-9.554e-02	1.0000	400.0	6.05%	2711.6	6.45%
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATAASR	1e0	-9.473e-02	1.0000	450.0	6.81%	3039.6	7.22%
IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	CTTTCANTATGACTV	1e0	-9.466e-02	1.0000	25.0	0.38%	203.6	0.48%
p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	RRCATGYCYRGRCATGYYYN	1e0	-9.466e-02	1.0000	18.0	0.27%	152.3	0.36%
p53(p53)/Saos-p53-ChIP-Seq/Homer	RRCATGYCYRGRCATGYYYN	1e0	-9.466e-02	1.0000	18.0	0.27%	152.3	0.36%
AREB3(bZIP)/col-AREB3-DAP-Seq(GSE60143)/Homer	NKGMCACGTGDCMNN	1e0	-9.430e-02	1.0000	144.0	2.18%	1019.8	2.42%
GRF9(GRF)/colamp-GRF9-DAP-Seq(GSE60143)/Homer	NWCTGACANNNNNNN	1e0	-9.302e-02	1.0000	363.0	5.49%	2470.2	5.87%
NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer	NVCACGTG	1e0	-9.270e-02	1.0000	777.0	11.75%	5170.0	12.29%
TCP3(TCP)/colamp-TCP3-DAP-Seq(GSE60143)/Homer	WGTGGTCCCAAHWWW	1e0	-9.246e-02	1.0000	66.0	1.00%	491.1	1.17%
bZIP53(bZIP)/colamp-bZIP53-DAP-Seq(GSE60143)/Homer	NDNHSACGTGKMNNN	1e0	-8.927e-02	1.0000	152.0	2.30%	1075.4	2.56%
Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer	BSNTGTTTACWYWGN	1e0	-8.771e-02	1.0000	71.0	1.07%	527.4	1.25%
ANAC087(NAC)/col-ANAC087-DAP-Seq(GSE60143)/Homer	WVCKTGHNNNWCAMG	1e0	-8.590e-02	1.0000	94.0	1.42%	685.5	1.63%
ANAC053(NAC)/colamp-ANAC053-DAP-Seq(GSE60143)/Homer	TDCTTGNNNNNCAAG	1e0	-8.548e-02	1.0000	141.0	2.13%	1003.5	2.39%
PLT1(AP2EREBP)/colamp-PLT1-DAP-Seq(GSE60143)/Homer	GCACGAWTYCCGAGG	1e0	-8.489e-02	1.0000	29.0	0.44%	235.0	0.56%
GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATGKDGAGATAAG	1e0	-8.455e-02	1.0000	14.0	0.21%	124.2	0.30%
At5g47390(MYBrelated)/col-At5g47390-DAP-Seq(GSE60143)/Homer	CTTATCCA	1e0	-8.370e-02	1.0000	341.0	5.16%	2332.2	5.54%
NTM2(NAC)/col-NTM2-DAP-Seq(GSE60143)/Homer	CTTRTNNNAYAAGBH	1e0	-8.345e-02	1.0000	141.0	2.13%	1004.3	2.39%
At1g69690(TCP)/colamp-At1g69690-DAP-Seq(GSE60143)/Homer	NHGTGGGGCCCACHW	1e0	-8.284e-02	1.0000	77.0	1.16%	570.0	1.35%
E-box/Arabidopsis-Promoters/Homer	GCCACGTG	1e0	-8.148e-02	1.0000	357.0	5.40%	2439.0	5.80%
ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer	GTCWGCTGTYYCTCT	1e0	-8.002e-02	1.0000	24.0	0.36%	199.7	0.47%
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	CCWTTGTY	1e0	-7.894e-02	1.0000	671.0	10.15%	4495.0	10.68%
GATA19(C2C2gata)/colamp-GATA19-DAP-Seq(GSE60143)/Homer	ATCSGATCVG	1e0	-7.719e-02	1.0000	17.0	0.26%	148.5	0.35%
EPR1(MYBrelated)/colamp-EPR1-DAP-Seq(GSE60143)/Homer	AAATATCT	1e0	-7.715e-02	1.0000	86.0	1.30%	634.1	1.51%
LHY1(MYBrelated)/col-LHY1-DAP-Seq(GSE60143)/Homer	AAATATCT	1e0	-7.715e-02	1.0000	86.0	1.30%	634.1	1.51%
PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	ACCRTGACTAATTNN	1e0	-7.686e-02	1.0000	46.0	0.70%	357.6	0.85%
At1g25550(G2like)/colamp-At1g25550-DAP-Seq(GSE60143)/Homer	NAGATTCY	1e0	-7.679e-02	1.0000	257.0	3.89%	1782.9	4.24%
VND4(NAC)/colamp-VND4-DAP-Seq(GSE60143)/Homer	WRCTTGWANWWCAAG	1e0	-7.609e-02	1.0000	204.0	3.09%	1430.9	3.40%
NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	GATGACTCAGCA	1e0	-7.597e-02	1.0000	13.0	0.20%	118.6	0.28%
ANAC058(NAC)/col-ANAC058-DAP-Seq(GSE60143)/Homer	TWCTTGTDNNACAAG	1e0	-7.404e-02	1.0000	152.0	2.30%	1083.0	2.57%
ABF2(bZIP)/col-ABF2-DAP-Seq(GSE60143)/Homer	KGMCACGTGDCMHHH	1e0	-7.338e-02	1.0000	102.0	1.54%	745.9	1.77%
SFP1/SacCer-Promoters/Homer	DDAAAAATTTTY	1e0	-7.095e-02	1.0000	13.0	0.20%	120.0	0.29%
TCP7(TCP)/col-TCP7-DAP-Seq(GSE60143)/Homer	GTGGGSCCCACHHNN	1e0	-6.966e-02	1.0000	274.0	4.14%	1900.2	4.52%
AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer	SCCTSAGGSCAW	1e0	-6.874e-02	1.0000	958.0	14.49%	6371.8	15.15%
ATHB53(HB)/col-ATHB53-DAP-Seq(GSE60143)/Homer	CAATAATT	1e0	-6.580e-02	1.0000	112.0	1.69%	817.5	1.94%
AGL6(MADS)/col-AGL6-DAP-Seq(GSE60143)/Homer	TTWCCWWAWWDGGWA	1e0	-6.457e-02	1.0000	27.0	0.41%	225.6	0.54%
PLT3(AP2EREBP)/col-PLT3-DAP-Seq(GSE60143)/Homer	GCACGNWTHYCGAGG	1e0	-6.430e-02	1.0000	19.0	0.29%	166.7	0.40%
WRKY75(WRKY)/col-WRKY75-DAP-Seq(GSE60143)/Homer	CGTTGACTWW	1e0	-6.317e-02	1.0000	173.0	2.62%	1231.6	2.93%
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	ATTAACACCT	1e0	-6.196e-02	1.0000	779.0	11.78%	5218.6	12.40%
PIF7(bHLH)/col-PIF7-DAP-Seq(GSE60143)/Homer	CCACGTGGNH	1e0	-5.945e-02	1.0000	144.0	2.18%	1038.3	2.47%
Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer	GWAAYHTGAKMC	1e0	-5.935e-02	1.0000	270.0	4.08%	1882.7	4.48%
AT2G38300(G2like)/col-AT2G38300-DAP-Seq(GSE60143)/Homer	ADRGAATGTT	1e0	-5.887e-02	1.0000	349.0	5.28%	2406.7	5.72%
ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer	VAGGTCACNSTGACC	1e0	-5.733e-02	1.0000	81.0	1.23%	609.6	1.45%
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	GGCCATAAATCA	1e0	-5.470e-02	1.0000	158.0	2.39%	1136.9	2.70%
ANAC016(NAC)/col-ANAC016-DAP-Seq(GSE60143)/Homer	WNCTTGNNNNNCAMG	1e0	-5.462e-02	1.0000	271.0	4.10%	1893.8	4.50%
BOS1(MYB)/col-BOS1-DAP-Seq(GSE60143)/Homer	NNRCCTAACT	1e0	-5.451e-02	1.0000	324.0	4.90%	2245.6	5.34%
MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	AACAGCTG	1e0	-5.449e-02	1.0000	766.0	11.59%	5144.4	12.23%
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	VAGRACAKNCTGTBC	1e0	-5.448e-02	1.0000	917.0	13.87%	6126.3	14.56%
At2g45680(TCP)/colamp-At2g45680-DAP-Seq(GSE60143)/Homer	GTGGGNCCCACNDND	1e0	-5.436e-02	1.0000	16.0	0.24%	147.0	0.35%
CUC1(NAC)/col-CUC1-DAP-Seq(GSE60143)/Homer	TACTTGTNNNACAAG	1e0	-5.378e-02	1.0000	113.0	1.71%	831.2	1.98%
OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	YATGCATATRCATRT	1e0	-5.373e-02	1.0000	13.0	0.20%	123.9	0.29%
At3g04030(G2like)/col-At3g04030-DAP-Seq(GSE60143)/Homer	DRGAATCT	1e0	-5.327e-02	1.0000	223.0	3.37%	1574.5	3.74%
CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	GHCACGTG	1e0	-5.124e-02	1.0000	336.0	5.08%	2328.1	5.53%
MYB27(MYB)/colamp-MYB27-DAP-Seq(GSE60143)/Homer	TACCTAACWT	1e0	-5.083e-02	1.0000	35.0	0.53%	288.2	0.68%
USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	SGTCACGTGR	1e0	-5.040e-02	1.0000	286.0	4.33%	1997.5	4.75%
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	BTCAAGGTCA	1e0	-4.803e-02	1.0000	119.0	1.80%	876.9	2.08%
NAC2(NAC)/colamp-NAC2-DAP-Seq(GSE60143)/Homer	TDCTTGNNNNNCAAG	1e0	-4.515e-02	1.0000	174.0	2.63%	1252.5	2.98%
GT1(Trihelix)/col-GT1-DAP-Seq(GSE60143)/Homer	TTAACCATGGTTAAD	1e0	-4.408e-02	1.0000	1.0	0.02%	20.4	0.05%
VND3(NAC)/colamp-VND3-DAP-Seq(GSE60143)/Homer	TRCTTGWDNHWCAAG	1e0	-4.384e-02	1.0000	183.0	2.77%	1314.2	3.12%
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	GKVTCADRTTWC	1e0	-4.366e-02	1.0000	49.0	0.74%	392.8	0.93%
NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WNTGTTTRYTTTGGCA	1e0	-4.339e-02	1.0000	13.0	0.20%	126.4	0.30%
AT4G37180(G2like)/col-AT4G37180-DAP-Seq(GSE60143)/Homer	AGAATCTTNN	1e0	-4.321e-02	1.0000	286.0	4.33%	2005.6	4.77%
Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer	CCATTGTATGCAAAT	1e0	-4.204e-02	1.0000	32.0	0.48%	270.7	0.64%
ANAC004(NAC)/colamp-ANAC004-DAP-Seq(GSE60143)/Homer	WNCTTVYNNNRBAAG	1e0	-4.087e-02	1.0000	84.0	1.27%	640.1	1.52%
FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer	NVWTGTTTAC	1e0	-4.048e-02	1.0000	296.0	4.48%	2075.4	4.93%
GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer	CGTGGGTGGTCC	1e0	-4.025e-02	1.0000	25.0	0.38%	219.5	0.52%
RVE1(MYBrelated)/col-RVE1-DAP-Seq(GSE60143)/Homer	AAATATCT	1e0	-3.987e-02	1.0000	129.0	1.95%	952.0	2.26%
GATA6(C2C2gata)/col200-GATA6-DAP-Seq(GSE60143)/Homer	TAGATCTARAHH	1e0	-3.908e-02	1.0000	26.0	0.39%	227.5	0.54%
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	GTCCCCWGGGGA	1e0	-3.793e-02	1.0000	555.0	8.40%	3791.4	9.01%
DAG2(C2C2dof)/col-DAG2-DAP-Seq(GSE60143)/Homer	WWTTHACTTTTT	1e0	-3.767e-02	1.0000	516.0	7.81%	3535.7	8.40%
WRKY33(WRKY)/col-WRKY33-DAP-Seq(GSE60143)/Homer	CGTTGACYAW	1e0	-3.671e-02	1.0000	141.0	2.13%	1036.1	2.46%
WRKY43(WRKY)/colamp-WRKY43-DAP-Seq(GSE60143)/Homer	NCGTTGACTTTT	1e0	-3.654e-02	1.0000	48.0	0.73%	389.3	0.93%
HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	CARRGKBCAAAGTYCA	1e0	-3.645e-02	1.0000	93.0	1.41%	707.0	1.68%
GATA4(C2C2gata)/col-GATA4-DAP-Seq(GSE60143)/Homer	DDWTYAGATCTR	1e0	-3.608e-02	1.0000	204.0	3.09%	1464.9	3.48%
WRKY46(WRKY)/colamp-WRKY46-DAP-Seq(GSE60143)/Homer	AAAGTCAACGSN	1e0	-3.521e-02	1.0000	8.0	0.12%	88.1	0.21%
STOP1(C2H2)/colamp-STOP1-DAP-Seq(GSE60143)/Homer	DTATCTGGKGRAGGT	1e0	-3.473e-02	1.0000	147.0	2.22%	1079.4	2.57%
TCP16(TCP)/colamp-TCP16-DAP-Seq(GSE60143)/Homer	GTGGDCCYNNNNNNN	1e0	-3.459e-02	1.0000	244.0	3.69%	1735.7	4.13%
bZIP52(bZIP)/colamp-bZIP52-DAP-Seq(GSE60143)/Homer	NDNHCAGCTGTCANN	1e0	-3.444e-02	1.0000	614.0	9.29%	4185.1	9.95%
RAV1(RAV)/colamp-RAV1-DAP-Seq(GSE60143)/Homer	TWWTTTCTGTTG	1e0	-3.422e-02	1.0000	197.0	2.98%	1420.0	3.38%
Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer	NYTAATCCYB	1e0	-3.402e-02	1.0000	210.0	3.18%	1507.1	3.58%
ANAC017(NAC)/colamp-ANAC017-DAP-Seq(GSE60143)/Homer	TMCTTGNNNNNCAAG	1e0	-3.382e-02	1.0000	29.0	0.44%	252.3	0.60%
AT1G72740(MYBrelated)/colamp-AT1G72740-DAP-Seq(GSE60143)/Homer	NNWWAMCCTAAHWNN	1e0	-3.363e-02	1.0000	238.0	3.60%	1697.0	4.03%
GATA12(C2C2gata)/col-GATA12-DAP-Seq(GSE60143)/Homer	YAGATCTRAW	1e0	-3.238e-02	1.0000	156.0	2.36%	1143.7	2.72%
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	CCATTGTTNY	1e0	-3.172e-02	1.0000	604.0	9.14%	4125.8	9.81%
AT3G10113(MYBrelated)/col-AT3G10113-DAP-Seq(GSE60143)/Homer	WNAAATATCWWN	1e0	-3.159e-02	1.0000	100.0	1.51%	759.5	1.81%
WIP5(C2H2)/colamp-WIP5-DAP-Seq(GSE60143)/Homer	TDTTCTCMAGGT	1e0	-3.148e-02	1.0000	413.0	6.25%	2866.8	6.81%
GATA1(C2C2gata)/colamp-GATA1-DAP-Seq(GSE60143)/Homer	DDWWYYAGATCTRRW	1e0	-3.106e-02	1.0000	84.0	1.27%	648.3	1.54%
PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer	AAGAACATWHTGTTC	1e0	-2.893e-02	1.0000	57.0	0.86%	459.2	1.09%
Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	ATATGCAAAT	1e0	-2.890e-02	1.0000	81.0	1.23%	629.9	1.50%
MYB92(MYB)/colamp-MYB92-DAP-Seq(GSE60143)/Homer	GGTAGGTR	1e0	-2.878e-02	1.0000	369.0	5.58%	2579.5	6.13%
dHNF4(NR)/Fly-HNF4-ChIP-Seq(GSE73675)/Homer	GGTCCAAAGTCCAMT	1e0	-2.757e-02	1.0000	4.0	0.06%	55.5	0.13%
AGL15(MADS)/col-AGL15-DAP-Seq(GSE60143)/Homer	TTTCCHWATWDGGAA	1e0	-2.695e-02	1.0000	33.0	0.50%	286.9	0.68%
OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATWATTCATGA	1e0	-2.688e-02	1.0000	2.0	0.03%	35.4	0.08%
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	AGGTCAAGGTCA	1e0	-2.688e-02	1.0000	2.0	0.03%	35.4	0.08%
ANAC057(NAC)/colamp-ANAC057-DAP-Seq(GSE60143)/Homer	DVCKTGNNNNNCAMG	1e0	-2.681e-02	1.0000	231.0	3.49%	1659.9	3.95%
WRKY47(WRKY)/colamp-WRKY47-DAP-Seq(GSE60143)/Homer	WAAGTCAACGBT	1e0	-2.639e-02	1.0000	37.0	0.56%	316.1	0.75%
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	ASATCAAAGGVA	1e0	-2.584e-02	1.0000	119.0	1.80%	897.1	2.13%
FRS9(ND)/col-FRS9-DAP-Seq(GSE60143)/Homer	RGAGAGAGAAAG	1e0	-2.576e-02	1.0000	77.0	1.16%	605.0	1.44%
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGMATATDC	1e0	-2.402e-02	1.0000	242.0	3.66%	1738.9	4.13%
WRKY22(WRKY)/colamp-WRKY22-DAP-Seq(GSE60143)/Homer	WWAAAGTCAACK	1e0	-2.338e-02	1.0000	105.0	1.59%	803.5	1.91%
EIN3(EIL)/col-EIN3-DAP-Seq(GSE60143)/Homer	ARATTCAATGWATYT	1e0	-2.303e-02	1.0000	24.0	0.36%	221.4	0.53%
AT3G42860(zfGRF)/col-AT3G42860-DAP-Seq(GSE60143)/Homer	CGTTGACTTN	1e0	-2.284e-02	1.0000	40.0	0.61%	341.8	0.81%
WRKY11(WRKY)/col-WRKY11-DAP-Seq(GSE60143)/Homer	SCGTTGACTTTN	1e0	-2.250e-02	1.0000	16.0	0.24%	159.9	0.38%
At1g72010(TCP)/colamp-At1g72010-DAP-Seq(GSE60143)/Homer	GGDCCCAC	1e0	-2.243e-02	1.0000	265.0	4.01%	1896.4	4.51%
GBF3(bZIP)/Arabidopsis-GBF3-ChIP-Seq(GSE80564)/Homer	TGCCACGTSAYC	1e0	-2.194e-02	1.0000	151.0	2.28%	1123.8	2.67%
AT5G56840(MYBrelated)/colamp-AT5G56840-DAP-Seq(GSE60143)/Homer	TGGATAAGGT	1e0	-2.179e-02	1.0000	315.0	4.76%	2233.6	5.31%
TCP20(TCP)/col-TCP20-DAP-Seq(GSE60143)/Homer	GGDCCCAC	1e0	-2.050e-02	1.0000	229.0	3.46%	1657.8	3.94%
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	BCCATTGTTC	1e0	-2.006e-02	1.0000	315.0	4.76%	2237.4	5.32%
AT5G61620(MYBrelated)/colamp-AT5G61620-DAP-Seq(GSE60143)/Homer	CTTATCCA	1e0	-1.998e-02	1.0000	385.0	5.82%	2705.6	6.43%
PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	ACTTTCACTTTC	1e0	-1.966e-02	1.0000	141.0	2.13%	1058.9	2.52%
At2g01060(G2like)/colamp-At2g01060-DAP-Seq(GSE60143)/Homer	AGATKCBNWW	1e0	-1.956e-02	1.0000	1024.0	15.49%	6907.5	16.42%
GATA14(C2C2gata)/col-GATA14-DAP-Seq(GSE60143)/Homer	AYCAGATCTG	1e0	-1.814e-02	1.0000	195.0	2.95%	1431.5	3.40%
ANAC062(NAC)/colamp-ANAC062-DAP-Seq(GSE60143)/Homer	TACTTANTNWNYAAG	1e0	-1.802e-02	1.0000	83.0	1.26%	656.2	1.56%
At1g49010(MYBrelated)/col-At1g49010-DAP-Seq(GSE60143)/Homer	RGATAASNTT	1e0	-1.736e-02	1.0000	526.0	7.96%	3649.5	8.67%
VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer	ARAGGTCANWGAGTTCANNN	1e0	-1.688e-02	1.0000	48.0	0.73%	406.7	0.97%
WRKY3(WRKY)/col-WRKY3-DAP-Seq(GSE60143)/Homer	NCKTTGACYDDN	1e0	-1.671e-02	1.0000	102.0	1.54%	792.3	1.88%
At3g24120(G2like)/col-At3g24120-DAP-Seq(GSE60143)/Homer	NWWAGMATMW	1e0	-1.665e-02	1.0000	1166.0	17.64%	7844.2	18.65%
GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer	RGGATTAR	1e0	-1.562e-02	1.0000	311.0	4.70%	2222.7	5.28%
TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer	GAGGTCAAAGGTCA	1e0	-1.559e-02	1.0000	15.0	0.23%	156.7	0.37%
WRKY28(WRKY)/col-WRKY28-DAP-Seq(GSE60143)/Homer	BGTTGACTWH	1e0	-1.484e-02	1.0000	240.0	3.63%	1745.9	4.15%
Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	NAHCAGCTGD	1e0	-1.483e-02	1.0000	857.0	12.96%	5837.6	13.88%
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	ASWTCAAAGG	1e0	-1.480e-02	1.0000	63.0	0.95%	518.9	1.23%
AT2G28920(ND)/col-AT2G28920-DAP-Seq(GSE60143)/Homer	WAGATATTTWTW	1e0	-1.478e-02	1.0000	55.0	0.83%	460.1	1.09%
At5g22890(C2H2)/col-At5g22890-DAP-Seq(GSE60143)/Homer	NSAGGTKWTATCTGD	1e0	-1.402e-02	1.0000	4.0	0.06%	61.7	0.15%
WRKY42(WRKY)/colamp-WRKY42-DAP-Seq(GSE60143)/Homer	NAAAGTCAACGN	1e0	-1.394e-02	1.0000	54.0	0.82%	454.7	1.08%
MYB39(MYB)/col-MYB39-DAP-Seq(GSE60143)/Homer	WWAARKTAGGTGRAA	1e0	-1.362e-02	1.0000	26.0	0.39%	245.5	0.58%
GATA20(C2C2gata)/colamp-GATA20-DAP-Seq(GSE60143)/Homer	TNGATCNDNM	1e0	-1.337e-02	1.0000	645.0	9.76%	4451.6	10.58%
PCF/Arabidopsis-Promoters/Homer	NNWWWTGGGCYTDDN	1e0	-1.254e-02	1.0000	45.0	0.68%	390.6	0.93%
MYB116(MYB)/colamp-MYB116-DAP-Seq(GSE60143)/Homer	AGTTAGGCAN	1e0	-1.239e-02	1.0000	191.0	2.89%	1418.8	3.37%
E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	DNRCAGCTGY	1e0	-1.189e-02	1.0000	1118.0	16.91%	7558.2	17.97%
GATA11(C2C2gata)/col-GATA11-DAP-Seq(GSE60143)/Homer	DDHYYAGATCTR	1e0	-1.172e-02	1.0000	101.0	1.53%	795.9	1.89%
ANAC028(NAC)/col-ANAC028-DAP-Seq(GSE60143)/Homer	WRCTTGNNNNNCAAG	1e0	-1.073e-02	1.0000	185.0	2.80%	1382.7	3.29%
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATATTC	1e0	-1.068e-02	1.0000	15.0	0.23%	161.8	0.38%
AT2G40260(G2like)/colamp-AT2G40260-DAP-Seq(GSE60143)/Homer	WAAAYATTCTTT	1e0	-1.063e-02	1.0000	398.0	6.02%	2824.5	6.71%
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	TWGTCTGV	1e0	-9.390e-03	1.0000	1086.0	16.43%	7367.4	17.51%
ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer	VCAGGTRDRY	1e0	-8.903e-03	1.0000	1056.0	15.97%	7175.2	17.06%
ANAC050(NAC)/colamp-ANAC050-DAP-Seq(GSE60143)/Homer	WNCTTGNNNNNCAAG	1e0	-8.737e-03	1.0000	149.0	2.25%	1140.1	2.71%
bZIP48(bZIP)/colamp-bZIP48-DAP-Seq(GSE60143)/Homer	DDWWKVTSACGTGGC	1e0	-8.538e-03	1.0000	125.0	1.89%	973.1	2.31%
MYB121(MYB)/col-MYB121-DAP-Seq(GSE60143)/Homer	YNTACCTAACWW	1e0	-8.415e-03	1.0000	71.0	1.07%	589.1	1.40%
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	DGTCCCYRGGGA	1e0	-8.323e-03	1.0000	70.0	1.06%	582.7	1.39%
Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer	WATGCAAATGAG	1e0	-8.072e-03	1.0000	111.0	1.68%	876.5	2.08%
MYB83(MYB)/colamp-MYB83-DAP-Seq(GSE60143)/Homer	CACCAACCWH	1e0	-7.960e-03	1.0000	601.0	9.09%	4191.7	9.96%
ANAC005(NAC)/col-ANAC005-DAP-Seq(GSE60143)/Homer	WVCTTVTWNHABAAG	1e0	-7.859e-03	1.0000	115.0	1.74%	906.0	2.15%
ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer	AACATCTGGA	1e0	-7.287e-03	1.0000	253.0	3.83%	1862.1	4.43%
WRKY45(WRKY)/col-WRKY45-DAP-Seq(GSE60143)/Homer	HNNNKTTGACTWWNH	1e0	-7.264e-03	1.0000	60.0	0.91%	512.8	1.22%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	AGGTCAAGGTCA	1e0	-7.239e-03	1.0000	15.0	0.23%	166.5	0.40%
WRKY20(WRKY)/col-WRKY20-DAP-Seq(GSE60143)/Homer	CKTTGACYWD	1e0	-7.183e-03	1.0000	124.0	1.88%	971.2	2.31%
bHLH34(bHLH)/colamp-bHLH34-DAP-Seq(GSE60143)/Homer	HGWGRHWGACACGTG	1e0	-7.160e-03	1.0000	157.0	2.37%	1202.3	2.86%
HAP3(CCAATHAP3)/col-HAP3-DAP-Seq(GSE60143)/Homer	TGATGGAW	1e0	-7.151e-03	1.0000	107.0	1.62%	851.8	2.02%
ABI5(bZIP)/col-ABI5-DAP-Seq(GSE60143)/Homer	GCCACGTG	1e0	-6.566e-03	1.0000	275.0	4.16%	2016.9	4.79%
At4g38000(C2C2dof)/col-At4g38000-DAP-Seq(GSE60143)/Homer	WWWTWACTTTTT	1e0	-6.392e-03	1.0000	309.0	4.67%	2248.4	5.34%
Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGCATAATTCA	1e0	-6.151e-03	1.0000	74.0	1.12%	619.0	1.47%
WRKY65(WRKY)/colamp-WRKY65-DAP-Seq(GSE60143)/Homer	AWWWAGTCAACG	1e0	-6.136e-03	1.0000	67.0	1.01%	567.7	1.35%
MYB57(MYB)/col-MYB57-DAP-Seq(GSE60143)/Homer	TTACCTAACT	1e0	-6.126e-03	1.0000	98.0	1.48%	791.3	1.88%
WRKY26(WRKY)/colamp-WRKY26-DAP-Seq(GSE60143)/Homer	CGTTGACTWDKN	1e0	-6.000e-03	1.0000	84.0	1.27%	691.4	1.64%
CCA(Myb)/Arabidopsis-CCA.GFP-ChIP-Seq(GSE70533)/Homer	AGATATYTTT	1e0	-5.931e-03	1.0000	191.0	2.89%	1444.9	3.43%
NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	KCCACGTGAC	1e0	-5.923e-03	1.0000	534.0	8.08%	3762.6	8.94%
Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer	GGATGACTCATC	1e0	-5.001e-03	1.0000	97.0	1.47%	790.0	1.88%
Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer	CCWTTGTYYB	1e0	-4.930e-03	1.0000	658.0	9.95%	4596.6	10.93%
GBF5(bZIP)/colamp-GBF5-DAP-Seq(GSE60143)/Homer	WKNWSACGTGGCAWN	1e0	-4.663e-03	1.0000	112.0	1.69%	898.5	2.14%
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	DATGASTCAT	1e0	-4.623e-03	1.0000	132.0	2.00%	1040.9	2.47%
bHLH18(bHLH)/col-bHLH18-DAP-Seq(GSE60143)/Homer	CACGTGTTYCACGTG	1e0	-4.526e-03	1.0000	5.0	0.08%	81.6	0.19%
AT3G10580(MYBrelated)/colamp-AT3G10580-DAP-Seq(GSE60143)/Homer	TACCTAACWNHW	1e0	-4.321e-03	1.0000	89.0	1.35%	735.0	1.75%
ANAC096(NAC)/colamp-ANAC096-DAP-Seq(GSE60143)/Homer	TACTTGWNNNWCAAG	1e0	-4.139e-03	1.0000	163.0	2.47%	1261.5	3.00%
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	CTGGCAGSCTGCCA	1e0	-4.138e-03	1.0000	155.0	2.34%	1205.4	2.87%
At1g68670(G2like)/colamp-At1g68670-DAP-Seq(GSE60143)/Homer	WNWWHNRAAGATTCT	1e0	-4.124e-03	1.0000	93.0	1.41%	765.7	1.82%
GATA15(C2C2gata)/col-GATA15-DAP-Seq(GSE60143)/Homer	KATGATCA	1e0	-3.736e-03	1.0000	361.0	5.46%	2623.1	6.24%
RLR1?/SacCer-Promoters/Homer	WTTTTCYYTTTT	1e0	-3.722e-03	1.0000	83.0	1.26%	696.0	1.65%
Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	TATGCWAATBAV	1e0	-3.597e-03	1.0000	77.0	1.16%	652.3	1.55%
At5g52660(MYBrelated)/colamp-At5g52660-DAP-Seq(GSE60143)/Homer	HAAAAATATCTW	1e0	-3.576e-03	1.0000	87.0	1.32%	725.7	1.73%
At4g01280(MYBrelated)/colamp-At4g01280-DAP-Seq(GSE60143)/Homer	AAATATCT	1e0	-3.507e-03	1.0000	124.0	1.88%	991.4	2.36%
WRKY25(WRKY)/colamp-WRKY25-DAP-Seq(GSE60143)/Homer	NNNNHRGTCAAMNNN	1e0	-2.932e-03	1.0000	196.0	2.96%	1502.3	3.57%
GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NNNNNBAGATAWYATCTVHN	1e0	-2.757e-03	1.0000	23.0	0.35%	245.9	0.58%
FUS3(ABI3VP1)/col-FUS3-DAP-Seq(GSE60143)/Homer	DNNWTNTGCATGKNN	1e0	-2.753e-03	1.0000	412.0	6.23%	2981.5	7.09%
Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer	NAACAGCTGG	1e0	-2.746e-03	1.0000	661.0	10.00%	4648.5	11.05%
OBP4(C2C2dof)/col-OBP4-DAP-Seq(GSE60143)/Homer	WTTHACTTTTTB	1e0	-2.721e-03	1.0000	422.0	6.38%	3049.6	7.25%
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	CCAGGAACAG	1e0	-2.688e-03	1.0000	1999.0	30.24%	13386.1	31.82%
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	GATGASTCATCN	1e0	-2.500e-03	1.0000	38.0	0.57%	366.2	0.87%
WRKY31(WRKY)/colamp-WRKY31-DAP-Seq(GSE60143)/Homer	NCGTTGACTWWK	1e0	-2.477e-03	1.0000	105.0	1.59%	864.7	2.06%
MYB10(MYB)/col-MYB10-DAP-Seq(GSE60143)/Homer	YCCACCTACCHH	1e0	-2.462e-03	1.0000	85.0	1.29%	719.3	1.71%
WRKY21(WRKY)/colamp-WRKY21-DAP-Seq(GSE60143)/Homer	DCGTTGACTTTT	1e0	-2.433e-03	1.0000	11.0	0.17%	144.6	0.34%
BIM2(bHLH)/col-BIM2-DAP-Seq(GSE60143)/Homer	NNNNCACGTGNN	1e0	-2.221e-03	1.0000	392.0	5.93%	2855.0	6.79%
At5g08330(TCP)/col-At5g08330-DAP-Seq(GSE60143)/Homer	GGRCCCAC	1e0	-2.086e-03	1.0000	301.0	4.55%	2238.4	5.32%
BPC1(BBRBPC)/colamp-BPC1-DAP-Seq(GSE60143)/Homer	GARGAGAGAGAA	1e0	-2.080e-03	1.0000	153.0	2.31%	1211.5	2.88%
WRKY40(WRKY)/colamp-WRKY40-DAP-Seq(GSE60143)/Homer	AHWAGTCAAC	1e0	-2.058e-03	1.0000	82.0	1.24%	701.5	1.67%
WRKY8(WRKY)/colamp-WRKY8-DAP-Seq(GSE60143)/Homer	CGTTGACTTT	1e0	-2.030e-03	1.0000	12.0	0.18%	155.2	0.37%
MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer	WNTGCTGASTCAGCANWTTY	1e0	-1.913e-03	1.0000	124.0	1.88%	1007.6	2.40%
WRKY6(WRKY)/colamp-WRKY6-DAP-Seq(GSE60143)/Homer	NCGTTGACTWWD	1e0	-1.873e-03	1.0000	134.0	2.03%	1079.8	2.57%
AT5G25475(ABI3VP1)/col-AT5G25475-DAP-Seq(GSE60143)/Homer	RNNRNCAAGCADNDB	1e0	-1.847e-03	1.0000	517.0	7.82%	3706.1	8.81%
WRKY50(WRKY)/col-WRKY50-DAP-Seq(GSE60143)/Homer	NNTTGACTWNNGNNN	1e0	-1.788e-03	1.0000	164.0	2.48%	1294.0	3.08%
Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer	CCATTGTTYB	1e0	-1.708e-03	1.0000	202.0	3.06%	1561.4	3.71%
WRKY27(WRKY)/colamp-WRKY27-DAP-Seq(GSE60143)/Homer	NHGTTGACYTWD	1e0	-1.427e-03	1.0000	148.0	2.24%	1186.9	2.82%
MS188(MYB)/colamp-MS188-DAP-Seq(GSE60143)/Homer	WARKTAGGTRRA	1e0	-1.402e-03	1.0000	165.0	2.50%	1307.7	3.11%
WRKY18(WRKY)/col-WRKY18-DAP-Seq(GSE60143)/Homer	NNNTTGACYWNNNNN	1e0	-1.392e-03	1.0000	293.0	4.43%	2198.3	5.23%
WRKY24(WRKY)/colamp-WRKY24-DAP-Seq(GSE60143)/Homer	CGTTGACTWW	1e0	-1.373e-03	1.0000	133.0	2.01%	1080.9	2.57%
Pho2(bHLH)/Yeast-Pho2-ChIP-Seq(GSE29506)/Homer	CCCACGTGCT	1e0	-1.368e-03	1.0000	402.0	6.08%	2943.4	7.00%
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	NTATYGATCH	1e0	-1.297e-03	1.0000	115.0	1.74%	952.8	2.26%
PIF4(bHLH)/Seedling-PIF4-ChIP-Seq(GSE35315)/Homer	NNBCACGTGN	1e0	-1.263e-03	1.0000	526.0	7.96%	3784.9	9.00%
JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer	RATGASTCAT	1e0	-1.256e-03	1.0000	104.0	1.57%	874.0	2.08%
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	VTGACTCATC	1e0	-1.250e-03	1.0000	162.0	2.45%	1289.9	3.07%
bZIP3(bZIP)/col-bZIP3-DAP-Seq(GSE60143)/Homer	DWKNHSACGTGGCAD	1e0	-1.220e-03	1.0000	183.0	2.77%	1438.1	3.42%
At4g36780(BZR)/col-At4g36780-DAP-Seq(GSE60143)/Homer	NNNNNNCACGTGNNN	1e0	-1.103e-03	1.0000	168.0	2.54%	1335.1	3.17%
WRKY29(WRKY)/colamp-WRKY29-DAP-Seq(GSE60143)/Homer	MGTTGACTTT	1e0	-1.036e-03	1.0000	171.0	2.59%	1358.4	3.23%
WRKY14(WRKY)/colamp-WRKY14-DAP-Seq(GSE60143)/Homer	NCGTTGACTTTN	1e0	-1.014e-03	1.0000	67.0	1.01%	604.8	1.44%
Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer	RAACAATGGN	1e0	-9.880e-04	1.0000	327.0	4.95%	2444.3	5.81%
Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer	GGGGCTYGKCTGGGA	1e0	-9.730e-04	1.0000	174.0	2.63%	1381.5	3.28%
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	ABTTCYYRRGAA	1e0	-8.930e-04	1.0000	128.0	1.94%	1055.5	2.51%
Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer	NNATGASTCATH	1e0	-8.830e-04	1.0000	107.0	1.62%	903.3	2.15%
BZR1(BZR)/col-BZR1-DAP-Seq(GSE60143)/Homer	NNCRCACGTGCG	1e0	-8.490e-04	1.0000	58.0	0.88%	539.7	1.28%
Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	NNNVCTGWGYAAACASN	1e0	-8.130e-04	1.0000	320.0	4.84%	2403.5	5.71%
STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	TTCCKNAGAA	1e0	-7.920e-04	1.0000	133.0	2.01%	1094.6	2.60%
PIF5ox(bHLH)/Arabidopsis-PIF5ox-ChIP-Seq(GSE35062)/Homer	BCACGTGVDN	1e0	-7.700e-04	1.0000	478.0	7.23%	3482.1	8.28%
Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	RCCACGTGGYYN	1e0	-7.120e-04	1.0000	326.0	4.93%	2449.0	5.82%
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	AGGCCTRG	1e0	-6.980e-04	1.0000	508.0	7.68%	3689.2	8.77%
Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer	HNRAATCAAT	1e0	-5.770e-04	1.0000	87.0	1.32%	765.7	1.82%
BAM8(BES1)/col-BAM8-DAP-Seq(GSE60143)/Homer	NNWSACACGTGTSWN	1e0	-5.000e-04	1.0000	56.0	0.85%	533.6	1.27%
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	YTGCCAAG	1e0	-4.890e-04	1.0000	967.0	14.63%	6770.7	16.09%
Pho4(bHLH)/Yeast-Pho4-ChIP-Seq(GSE29506)/Homer	AAGCACGTGBGD	1e0	-4.640e-04	1.0000	146.0	2.21%	1201.8	2.86%
MYB49(MYB)/col-MYB49-DAP-Seq(GSE60143)/Homer	ARKTAGGTRR	1e0	-4.260e-04	1.0000	273.0	4.13%	2100.3	4.99%
WRKY55(WRKY)/col-WRKY55-DAP-Seq(GSE60143)/Homer	NCGTTGACTT	1e0	-3.500e-04	1.0000	191.0	2.89%	1530.7	3.64%
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	DATGASTCATHN	1e0	-3.380e-04	1.0000	134.0	2.03%	1122.1	2.67%
Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAW	1e0	-3.230e-04	1.0000	117.0	1.77%	999.1	2.37%
MYB63(MYB)/col-MYB63-DAP-Seq(GSE60143)/Homer	BHYACCWACCHH	1e0	-3.000e-04	1.0000	115.0	1.74%	986.7	2.35%
At1g78700(BZR)/col-At1g78700-DAP-Seq(GSE60143)/Homer	NNNNCACGTGNNNNN	1e0	-2.190e-04	1.0000	179.0	2.71%	1457.4	3.46%
LHY(Myb)/Seedling-LHY-ChIP-Seq(GSE52175)/Homer	ADAAATATCT	1e0	-1.870e-04	1.0000	219.0	3.31%	1746.6	4.15%
BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	GNCACGTG	1e0	-1.700e-04	1.0000	779.0	11.78%	5573.6	13.25%
Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer	NATGASTCABNN	1e0	-1.540e-04	1.0000	54.0	0.82%	537.2	1.28%
TF3A(C2H2)/col-TF3A-DAP-Seq(GSE60143)/Homer	NNDDGAGGAGGWNNN	1e0	-1.350e-04	1.0000	621.0	9.39%	4522.4	10.75%
LCL1(MYBrelated)/colamp-LCL1-DAP-Seq(GSE60143)/Homer	NAAAATATCTWHWWN	1e0	-1.250e-04	1.0000	21.0	0.32%	267.8	0.64%
OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	ATGCATWATGCATRW	1e0	-1.240e-04	1.0000	171.0	2.59%	1414.7	3.36%
WRKY71(WRKY)/col-WRKY71-DAP-Seq(GSE60143)/Homer	CKTTGACYWW	1e0	-1.230e-04	1.0000	105.0	1.59%	931.2	2.21%
At3g09600(MYBrelated)/colamp-At3g09600-DAP-Seq(GSE60143)/Homer	AAAATATCTT	1e0	-1.100e-04	1.0000	84.0	1.27%	775.7	1.84%
Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer	YCTTTGTTCC	1e0	-9.300e-05	1.0000	315.0	4.76%	2441.9	5.80%
c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	VVCCACGTGG	1e0	-8.600e-05	1.0000	268.0	4.05%	2114.5	5.03%
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer	GGMGCTGTCCATGGTGCTGA	1e0	-6.800e-05	1.0000	1.0	0.02%	61.5	0.15%
GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	AAACYKGTTWDACMRGTTTB	1e0	-5.200e-05	1.0000	72.0	1.09%	696.3	1.66%
Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer	BTCAAGGTCA	1e0	-3.400e-05	1.0000	138.0	2.09%	1203.1	2.86%
MYB13(MYB)/col-MYB13-DAP-Seq(GSE60143)/Homer	HYCACCWACCHH	1e0	-3.200e-05	1.0000	148.0	2.24%	1278.0	3.04%
At4g18890(BZR)/col-At4g18890-DAP-Seq(GSE60143)/Homer	NDBRCACGTGYR	1e0	-2.400e-05	1.0000	105.0	1.59%	963.1	2.29%
LIN-39(Homeobox)/cElegans.L3-LIN39-ChIP-Seq(modEncode)/Homer	ATGATTRATG	1e0	-2.000e-05	1.0000	267.0	4.04%	2148.3	5.11%
MYB74(MYB)/colamp-MYB74-DAP-Seq(GSE60143)/Homer	YYYACCTACCWH	1e0	-1.900e-05	1.0000	124.0	1.88%	1111.1	2.64%
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	GCTAATCC	1e0	-1.800e-05	1.0000	687.0	10.39%	5050.0	12.00%
ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer	GAGCCTGGTACTGWGCCTGR	1e0	-1.100e-05	1.0000	91.0	1.38%	871.2	2.07%
MYB4(MYB)/col200-MYB4-DAP-Seq(GSE60143)/Homer	WAGKTAGGTARR	1e0	-8.000e-06	1.0000	129.0	1.95%	1165.0	2.77%
Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer	GTRGGTCASTGGGTCA	1e0	-5.000e-06	1.0000	23.0	0.35%	321.8	0.76%
RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	TAGGGCAAAGGTCA	1e0	-1.000e-06	1.0000	346.0	5.23%	2786.6	6.62%
SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer	CAAGGHCANV	1e0	-1.000e-06	1.0000	77.0	1.16%	799.0	1.90%
ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer	WDNCTGGGCA	1e0	-1.000e-06	1.0000	499.0	7.55%	3879.8	9.22%
PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer	TGACCTTTGCCCCA	1e0	-0.000e+00	1.0000	247.0	3.74%	2097.5	4.99%
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	CYTGGCABNSTGCCAR	1e0	-0.000e+00	1.0000	122.0	1.85%	1184.0	2.81%
Zelda(Zf)/Embryo-zld-ChIP-Seq(GSE65441)/Homer	KBCTACCTGW	1e0	-0.000e+00	1.0000	156.0	2.36%	1555.5	3.70%
ZFP3(Zf)/HEK293-ZFP3.GFP-ChIP-Seq(GSE58341)/Homer	GGGTTTTGAAGGATGARTAGGAGTT	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
At1g13300(G2like)/col-At1g13300-DAP-Seq(GSE60143)/Homer	GAATCTWAGATTCYN	1e0	0.000e+00	1.0000	0.0	0.00%	8.5	0.02%
AT4G12670(MYBrelated)/col-AT4G12670-DAP-Seq(GSE60143)/Homer	AGGGTTTAGGGTTTA	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
REM16(ABI3VP1)/col-REM16-DAP-Seq(GSE60143)/Homer	DTTTTTSCCGSMAAA	1e0	0.000e+00	1.0000	0.0	0.00%	2.9	0.01%
VRN1(ABI3VP1)/col-VRN1-DAP-Seq(GSE60143)/Homer	TTTTTTTTTT	1e0	0.000e+00	1.0000	0.0	0.00%	6.0	0.01%
WRKY17(WRKY)/colamp-WRKY17-DAP-Seq(GSE60143)/Homer	GCGTTGACTTTT	1e0	0.000e+00	1.0000	0.0	0.00%	6.6	0.02%
WRKY7(WRKY)/colamp-WRKY7-DAP-Seq(GSE60143)/Homer	AAAAGTCAACGSHWD	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%