Information for 11-GCAAAGTCCA (Motif 12)

T A C G A G T C C G T A C G T A G C T A T A C G A C G T G A T C G A T C G C T A
Reverse Opposite:
C G A T C T A G C T A G C G T A A T G C C G A T C G A T G A C T C T A G A T G C
p-value:1e-38
log p-value:-8.947e+01
Information Content per bp:1.842
Number of Target Sequences with motif156.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif69.5
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets102.2 +/- 55.2bp
Average Position of motif in Background104.3 +/- 56.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4G/MA0484.1/Jaspar

Match Rank:1
Score:0.84
Offset:-5
Orientation:forward strand
Alignment:-----GCAAAGTCCA
AGAGTCCAAAGTCCA
 A C G T A C G T A C G T A C G T A C G T T A C G A G T C C G T A C G T A G C T A T A C G A C G T G A T C G A T C G C T A
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:2
Score:0.84
Offset:-6
Orientation:forward strand
Alignment:------GCAAAGTCCA
CANAGNNCAAAGTCCA
 A C G T A C G T A C G T A C G T A C G T A C G T T A C G A G T C C G T A C G T A G C T A T A C G A C G T G A T C G A T C G C T A
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

PB0134.1_Hnf4a_2/Jaspar

Match Rank:3
Score:0.84
Offset:-2
Orientation:forward strand
Alignment:--GCAAAGTCCA----
GGCAAAAGTCCAATAA
 A C G T A C G T T A C G A G T C C G T A C G T A G C T A T A C G A C G T G A T C G A T C G C T A A C G T A C G T A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

dHNF4(NR)/Fly-HNF4-ChIP-Seq(GSE73675)/Homer

Match Rank:4
Score:0.83
Offset:-3
Orientation:forward strand
Alignment:---GCAAAGTCCA--
GGTCCAAAGTCCAMT
 A C G T A C G T A C G T T A C G A G T C C G T A C G T A G C T A T A C G A C G T G A T C G A T C G C T A A C G T A C G T
T C A G A C T G C A G T A G T C A G T C G T C A C G T A C G T A A C T G C A G T A G T C A G T C C T G A T G C A A G C T

Hnf4a/MA0114.3/Jaspar

Match Rank:5
Score:0.78
Offset:-4
Orientation:forward strand
Alignment:----GCAAAGTCCA--
GGGGTCAAAGTCCAAT
 A C G T A C G T A C G T A C G T T A C G A G T C C G T A C G T A G C T A T A C G A C G T G A T C G A T C G C T A A C G T A C G T
T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.71
Offset:1
Orientation:forward strand
Alignment:GCAAAGTCCA-
-CAAAGGTCAG
 T A C G A G T C C G T A C G T A G C T A T A C G A C G T G A T C G A T C G C T A A C G T
A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

dl/dmmpmm(Down)/fly

Match Rank:7
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GCAAAGTCCA
GGAAAATCCA
 T A C G A G T C C G T A C G T A G C T A T A C G A C G T G A T C G A T C G C T A
T C A G T C A G T C G A G T C A C G T A C G T A A G C T G T A C T A G C T C G A

WRKY8(WRKY)/colamp-WRKY8-DAP-Seq(GSE60143)/Homer

Match Rank:8
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GCAAAGTCCA--
--AAAGTCAACG
 T A C G A G T C C G T A C G T A G C T A T A C G A C G T G A T C G A T C G C T A A C G T A C G T
A C G T A C G T C T G A C G T A C T G A A C T G A C G T A G T C C G T A C G T A G T A C C T A G

tll/dmmpmm(Bigfoot)/fly

Match Rank:9
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GCAAAGTCCA
--AAAGTCAA
 T A C G A G T C C G T A C G T A G C T A T A C G A C G T G A T C G A T C G C T A
A C G T A C G T C T G A T C G A C T G A C T A G G A C T A G T C T C G A C T G A

tll/MA0459.1/Jaspar

Match Rank:10
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GCAAAGTCCA-
-AAAAGTCAAA
 T A C G A G T C C G T A C G T A G C T A T A C G A C G T G A T C G A T C G C T A A C G T
A C G T C G T A C T G A C G T A T C G A A C T G A G C T A G T C C G T A C G T A G T C A