Information for 13-BCSSGTTTTT (Motif 15)

A G T C G A T C A T C G A T G C A T C G G C A T A C G T A C G T C A G T A G C T
Reverse Opposite:
T C G A G T C A T G C A T G C A C G T A T A G C T A C G T A G C C T A G T C A G
p-value:1e-32
log p-value:-7.522e+01
Information Content per bp:1.454
Number of Target Sequences with motif2187.0
Percentage of Target Sequences with motif11.41%
Number of Background Sequences with motif2674.2
Percentage of Background Sequences with motif8.85%
Average Position of motif in Targets99.1 +/- 57.5bp
Average Position of motif in Background100.8 +/- 62.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PABPC3(RRM)/Homo_sapiens-RNCMPT00153-PBM/HughesRNA

Match Rank:1
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:BCSSGTTTTT
---GGTTTTC
 A G T C G A T C A T C G A T G C A T C G G C A T A C G T A C G T C A G T A G C T
A C G T A C G T A C G T A C T G C A T G A C G T A C G T A C G T A C G T A G T C

Pp_0229(RRM)/Physcomitrella_patens-RNCMPT00229-PBM/HughesRNA

Match Rank:2
Score:0.73
Offset:3
Orientation:forward strand
Alignment:BCSSGTTTTT
---TGTTTTT
 A G T C G A T C A T C G A T G C A T C G G C A T A C G T A C G T C A G T A G C T
A C G T A C G T A C G T C G A T A C T G C G A T A C G T A C G T A C G T C A G T

hb/dmmpmm(SeSiMCMC)/fly

Match Rank:3
Score:0.71
Offset:5
Orientation:forward strand
Alignment:BCSSGTTTTT-
-----TTTTTT
 A G T C G A T C A T C G A T G C A T C G G C A T A C G T A C G T C A G T A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A C G T A G C T C G A T G A C T C G A T

dl/MA0022.1/Jaspar

Match Rank:4
Score:0.71
Offset:1
Orientation:forward strand
Alignment:BCSSGTTTTT---
-GGGGTTTTTCCC
 A G T C G A T C A T C G A T G C A T C G G C A T A C G T A C G T C A G T A G C T A C G T A C G T A C G T
A C G T A T C G A C T G A C T G A C T G A C G T C A G T C G A T A C G T A G C T G A T C A G T C T A C G

TIAR-1(RRM)/Caenorhabditis_elegans-RNCMPT00256-PBM/HughesRNA

Match Rank:5
Score:0.69
Offset:4
Orientation:forward strand
Alignment:BCSSGTTTTT-
----NTTTTTT
 A G T C G A T C A T C G A T G C A T C G G C A T A C G T A C G T C A G T A G C T A C G T
A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A C G T A C G T A C G T

dl-A/dmmpmm(Bergman)/fly

Match Rank:6
Score:0.68
Offset:2
Orientation:forward strand
Alignment:BCSSGTTTTT---
--GGGTTTTTCCN
 A G T C G A T C A T C G A T G C A T C G G C A T A C G T A C G T C A G T A G C T A C G T A C G T A C G T
A C G T A C G T A C T G A C T G A C T G G C A T G C A T C G A T A C G T A C G T G T A C A G T C T A G C

TIA1(RRM)/Homo_sapiens-RNCMPT00077-PBM/HughesRNA

Match Rank:7
Score:0.68
Offset:5
Orientation:forward strand
Alignment:BCSSGTTTTT--
-----TTTTTTG
 A G T C G A T C A T C G A T G C A T C G G C A T A C G T A C G T C A G T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A C G T A C G T A C G T A C G T A G C T A C T G

U2AF50(RRM)/Drosophila_melanogaster-RNCMPT00080-PBM/HughesRNA

Match Rank:8
Score:0.67
Offset:5
Orientation:forward strand
Alignment:BCSSGTTTTT--
-----TTTTTTC
 A G T C G A T C A T C G A T G C A T C G G C A T A C G T A C G T C A G T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T A C G T A C G T A C G T A G C T A G C T A G T C

PFI1435w(RRM)/Plasmodium_falciparum-RNCMPT00202-PBM/HughesRNA

Match Rank:9
Score:0.67
Offset:5
Orientation:forward strand
Alignment:BCSSGTTTTT--
-----TTTTTTG
 A G T C G A T C A T C G A T G C A T C G G C A T A C G T A C G T C A G T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G

RALY(RRM)/Homo_sapiens-RNCMPT00159-PBM/HughesRNA

Match Rank:10
Score:0.67
Offset:5
Orientation:forward strand
Alignment:BCSSGTTTTT--
-----TTTTTTG
 A G T C G A T C A T C G A T G C A T C G G C A T A C G T A C G T C A G T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A C G T A C G T A C G T A C G T A C G T A C T G