Information for 19-GTTTACATTGGA (Motif 19)

A C T G A C G T C G A T G A C T T G C A G T A C G C T A A G C T C G A T T A C G T C A G T C G A
Reverse Opposite:
A G C T A G T C A T G C G C T A T C G A C G A T C A T G A C G T C T G A G C T A G T C A T G A C
p-value:1e-25
log p-value:-5.937e+01
Information Content per bp:1.700
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif0.14%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets84.9 +/- 61.0bp
Average Position of motif in Background134.3 +/- 51.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxa2/MA0047.2/Jaspar

Match Rank:1
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-GTTTACATTGGA
TGTTTACTTAGG-
 A C G T A C T G A C G T C G A T G A C T T G C A G T A C G C T A A G C T C G A T T A C G T C A G T C G A
A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:2
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----GTTTACATTGGA
TCCATGTTTACTTTG--
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G A T G A C T T G C A G T A C G C T A A G C T C G A T T A C G T C A G T C G A
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G A C G T A C G T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:3
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----GTTTACATTGGA
BSNTGTTTACWYWGN-
 A C G T A C G T A C G T A C G T A C T G A C G T C G A T G A C T T G C A G T A C G C T A A G C T C G A T T A C G T C A G T C G A
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---GTTTACATTGGA-
NNTGTTTATTTTGGCA
 A C G T A C G T A C G T A C T G A C G T C G A T G A C T T G C A G T A C G C T A A G C T C G A T T A C G T C A G T C G A A C G T
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:5
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---GTTTACATTGGA
CBTGTTTAYAWW---
 A C G T A C G T A C G T A C T G A C G T C G A T G A C T T G C A G T A C G C T A A G C T C G A T T A C G T C A G T C G A
A T G C A C G T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C T A C G A T G C A T A C G T A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GTTTACATTGGA
TGTTTACTTT---
 A C G T A C T G A C G T C G A T G A C T T G C A G T A C G C T A A G C T C G A T T A C G T C A G T C G A
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:7
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GTTTACATTGGA
TGTTTACTTT---
 A C G T A C T G A C G T C G A T G A C T T G C A G T A C G C T A A G C T C G A T T A C G T C A G T C G A
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T

Foxk1/MA0852.1/Jaspar

Match Rank:8
Score:0.68
Offset:-6
Orientation:reverse strand
Alignment:------GTTTACATTGGA
NNNTTTGTTTACATTTN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G A T G A C T T G C A G T A C G C T A A G C T C G A T T A C G T C A G T C G A
T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T A C G T

PB0018.1_Foxk1_1/Jaspar

Match Rank:9
Score:0.68
Offset:-6
Orientation:reverse strand
Alignment:------GTTTACATTGGA
NNNTTTGTTTACATTTN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G A T G A C T T G C A G T A C G C T A A G C T C G A T T A C G T C A G T C G A
T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T A C G T

CG11617/MA0173.1/Jaspar

Match Rank:10
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GTTTACATTGGA
-TTAACAT----
 A C T G A C G T C G A T G A C T T G C A G T A C G C T A A G C T C G A T T A C G T C A G T C G A
A C G T C G A T A C G T C G T A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T