Information for 4-AGCGCCMCCT (Motif 2)

C T G A T C A G A G T C A C T G G A T C T A G C T G C A G A T C A G T C A G C T
Reverse Opposite:
T C G A C T A G C T A G A C G T A T C G C T A G G T A C C T A G A G T C A G C T
p-value:1e-767
log p-value:-1.768e+03
Information Content per bp:1.710
Number of Target Sequences with motif2471.0
Percentage of Target Sequences with motif12.89%
Number of Background Sequences with motif927.5
Percentage of Background Sequences with motif3.07%
Average Position of motif in Targets98.5 +/- 48.0bp
Average Position of motif in Background103.3 +/- 62.4bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF/MA0531.1/Jaspar

Match Rank:1
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:AGCGCCMCCT-----
GGCGCCATCTAGCGG
 C T G A T C A G A G T C A C T G G A T C T A G C T G C A G A T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T
C T A G C T A G G T A C C T A G G T A C A G T C T G C A G A C T A G T C G A C T C T G A A C T G A G T C C A T G T A C G

RPN4/MA0373.1/Jaspar

Match Rank:2
Score:0.79
Offset:2
Orientation:reverse strand
Alignment:AGCGCCMCCT
--CGCCACC-
 C T G A T C A G A G T C A C T G G A T C T A G C T G C A G A T C A G T C A G C T
A C G T A C G T A G T C A C T G A G T C A G T C G T C A A G T C G A T C A C G T

RAP2-10/MA0980.1/Jaspar

Match Rank:3
Score:0.77
Offset:1
Orientation:forward strand
Alignment:AGCGCCMCCT
-GCGCCGCC-
 C T G A T C A G A G T C A C T G G A T C T A G C T G C A G A T C A G T C A G C T
A C G T A T C G G A T C C T A G T A G C A T G C C A T G A T G C G A T C A C G T

RAP2-6/MA1052.1/Jaspar

Match Rank:4
Score:0.77
Offset:1
Orientation:forward strand
Alignment:AGCGCCMCCT
-GCGCCGCC-
 C T G A T C A G A G T C A C T G G A T C T A G C T G C A G A T C A G T C A G C T
A C G T T A C G G T A C C T A G T A G C T G A C C T A G G A T C G T A C A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----AGCGCCMCCT------
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T C T G A T C A G A G T C A C T G G A T C T A G C T G C A G A T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

brk/dmmpmm(Bergman)/fly

Match Rank:6
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:AGCGCCMCCT
AGCGCCA---
 C T G A T C A G A G T C A C T G G A T C T A G C T G C A G A T C A G T C A G C T
C T G A C T A G A G T C A C T G A G T C A G T C G T C A A C G T A C G T A C G T

ERF109/MA1053.1/Jaspar

Match Rank:7
Score:0.75
Offset:1
Orientation:forward strand
Alignment:AGCGCCMCCT
-GCGCCGCC-
 C T G A T C A G A G T C A C T G G A T C T A G C T G C A G A T C A G T C A G C T
A C G T T A C G T G A C A T C G T A G C G T A C A T C G G A T C G T A C A C G T

brk/dmmpmm(Pollard)/fly

Match Rank:8
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:AGCGCCMCCT
GGCGCCAG--
 C T G A T C A G A G T C A C T G G A T C T A G C T G C A G A T C A G T C A G C T
T C A G C A T G A G T C A C T G A G T C A G T C C T G A A T C G A C G T A C G T

brk/MA0213.1/Jaspar

Match Rank:9
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:AGCGCCMCCT
GGCGCCAG--
 C T G A T C A G A G T C A C T G G A T C T A G C T G C A G A T C A G T C A G C T
T C A G C A T G A G T C A C T G A G T C A G T C C T G A A T C G A C G T A C G T

CRF4/MA0976.1/Jaspar

Match Rank:10
Score:0.75
Offset:1
Orientation:forward strand
Alignment:AGCGCCMCCT
-GCGCCGCC-
 C T G A T C A G A G T C A C T G G A T C T A G C T G C A G A T C A G T C A G C T
A C G T A T C G G T A C A C T G A T G C A G T C A T C G A G T C T G A C A C G T