Information for 22-TTTTGCTCGG (Motif 27)

A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A C T G A C T G
Reverse Opposite:
A G T C A G T C A C T G G T C A A C T G A G T C C G T A G T C A C G T A C G T A
p-value:1e-16
log p-value:-3.879e+01
Information Content per bp:1.959
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif0.10%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets90.2 +/- 51.8bp
Average Position of motif in Background96.1 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MAC1/MA0326.1/Jaspar

Match Rank:1
Score:0.83
Offset:1
Orientation:forward strand
Alignment:TTTTGCTCGG
-TTTGCTCA-
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A C T G A C T G
A C G T C G A T C A G T A C G T C T A G A G T C A C G T A G T C C T G A A C G T

MAC1/Literature(Harbison)/Yeast

Match Rank:2
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:TTTTGCTCGG
-TTTGCTC--
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A C T G A C T G
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A C G T A C G T

Ng_0261(RRM)/Naegleria_gruberi-RNCMPT00261-PBM/HughesRNA

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TTTTGCTCGG
AATTTTG-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A C T G A C T G
C T G A C T G A A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T

Sf3b4(RRM)/Danio_rerio-RNCMPT00224-PBM/HughesRNA

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTTTGCTCGG
CTTTTGN----
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A C T G A C T G
A G T C A C G T A C G T A C G T A C G T C T A G G T C A A C G T A C G T A C G T A C G T

ERF018/MA1048.1/Jaspar

Match Rank:5
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TTTTGCTCGG-
---TGGTCGGT
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A C T G A C T G A C G T
A C G T A C G T A C G T G C A T C A T G C T A G G C A T A G T C A C T G T C A G G A C T

NSI1/MA0421.1/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TTTTGCTCGG-
-TTTACCCGGC
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A C T G A C T G A C G T
A C G T C A G T A C G T A G C T C G T A A G T C A G T C G T A C A C T G C T A G G T A C

MAC1(MacIsaac)/Yeast

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TTTTGCTCGG
TTTTCGCTCA-
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A C T G A C T G
G A C T G A C T C A G T G C A T A G T C A C T G A G T C A C G T A G T C T G C A A C G T

AT5G25475(ABI3VP1)/col-AT5G25475-DAP-Seq(GSE60143)/Homer

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TTTTGCTCGG----
VHNHTGCTTGNYNNY
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A C T G A C T G A C G T A C G T A C G T A C G T
T C A G G C T A A G T C G C A T A C G T A C T G A G T C A C G T A C G T A C T G C A T G A G C T G T A C A C G T A G C T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:TTTTGCTCGG----
----GCTCGGSCTC
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C

pan/dmmpmm(Pollard)/fly

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTTTGCTCGG
CTTTGATC--
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A C T G A C T G
G A T C G A C T C G A T C G A T A C T G C T G A C G A T G T A C A C G T A C G T