Information for 22-CGGMCTAT (Motif 29)

A G T C A T C G C T A G G T A C T A G C G A C T C G T A A C G T
Reverse Opposite:
T G C A A C G T C T G A A T C G C A T G G A T C A T G C A C T G
p-value:1e-13
log p-value:-3.093e+01
Information Content per bp:1.676
Number of Target Sequences with motif153.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif123.3
Percentage of Background Sequences with motif0.41%
Average Position of motif in Targets99.7 +/- 58.3bp
Average Position of motif in Background103.5 +/- 63.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RGT1/Literature(Harbison)/Yeast

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CGGMCTAT
CGGANNA-
 A G T C A T C G C T A G G T A C T A G C G A C T C G T A A C G T
A G T C A C T G A C T G C G T A A C G T A C G T C G T A A C G T

YLL054C/MA0429.1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CGGMCTAT
CGGCCGA-
 A G T C A T C G C T A G G T A C T A G C G A C T C G T A A C G T
A G T C A C T G A C T G T G A C A T G C C T A G G C T A A C G T

br-Z2/dmmpmm(Pollard)/fly

Match Rank:3
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CGGMCTAT---
---TCTATTAA
 A G T C A T C G C T A G G T A C T A G C G A C T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T A T G C A C G T C G T A C A G T A C G T C G T A G C T A

MSI1(RRM)/Homo_sapiens-RNCMPT00176-PBM/HughesRNA

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CGGMCTAT
CTAACTA-
 A G T C A T C G C T A G G T A C T A G C G A C T C G T A A C G T
A G T C A G C T G C T A G T C A A G T C A C G T C G T A A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CGGMCTAT
AGGCCTAG
 A G T C A T C G C T A G G T A C T A G C G A C T C G T A A C G T
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

oc/dmmpmm(Bergman)/fly

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CGGMCTAT---
ANCGGATTAGNGN
 A C G T A C G T A G T C A T C G C T A G G T A C T A G C G A C T C G T A A C G T A C G T A C G T A C G T
C G T A C T A G T A G C A C T G A C T G G T C A A C G T A C G T C G T A C T A G A T C G A C T G A C G T

MSI1(RRM)/Homo_sapiens-RNCMPT00041-PBM/HughesRNA

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CGGMCTAT
CTAACTA-
 A G T C A T C G C T A G G T A C T A G C G A C T C G T A A C G T
A G T C A G C T C G T A G C T A A G T C A C G T C G T A A C G T

YLR278C/MA0430.1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CGGMCTAT
CCGGAGTT-
 A C G T A G T C A T C G C T A G G T A C T A G C G A C T C G T A A C G T
A G T C A G T C A C T G A C T G C T G A T A C G C G A T C G A T A C G T

RDS1/RDS1_H2O2Hi/[](Harbison)/Yeast

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CGGMCTAT
TCGGCCGA-
 A C G T A G T C A T C G C T A G G T A C T A G C G A C T C G T A A C G T
A C G T A T G C C T A G T A C G A T G C A G T C A C T G T G C A A C G T

br-Z2/dmmpmm(Bigfoot)/fly

Match Rank:10
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CGGMCTAT---
----CTATTTA
 A G T C A T C G C T A G G T A C T A G C G A C T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G A T C G A T G C A T C G T A