Information for 5-TGCTGCCACC (Motif 3)

A C G T C T A G A G T C A C G T A C T G A G T C A G T C C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A C T G A C T G A G T C C G T A A C T G A G T C C G T A
p-value:1e-179
log p-value:-4.142e+02
Information Content per bp:1.968
Number of Target Sequences with motif364.0
Percentage of Target Sequences with motif1.90%
Number of Background Sequences with motif79.6
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets98.5 +/- 35.6bp
Average Position of motif in Background97.1 +/- 56.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RPN4(MacIsaac)/Yeast

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TGCTGCCACC-
TTTTGCCACCG
 A C G T C T A G A G T C A C G T A C T G A G T C A G T C C G T A A G T C A G T C A C G T
C G A T A C G T C G A T G A C T A C T G A T G C A G T C T C G A A T G C G A T C A T C G

RPN4/MA0373.1/Jaspar

Match Rank:2
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:TGCTGCCACC
---CGCCACC
 A C G T C T A G A G T C A C G T A C T G A G T C A G T C C G T A A G T C A G T C
A C G T A C G T A C G T A G T C A C T G A G T C A G T C G T C A A G T C G A T C

Unknown3/Drosophila-Promoters/Homer

Match Rank:3
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TGCTGCCACC----
GCGCTGCCAGMTBGT
 A C G T A C G T C T A G A G T C A C G T A C T G A G T C A G T C C G T A A G T C A G T C A C G T A C G T A C G T A C G T
C T A G T A G C A C T G G A T C A C G T A C T G A G T C A G T C C G T A T A C G G T A C A G C T A G C T C A T G A G C T

RPN4/RPN4_H2O2Lo/[](Harbison)/Yeast

Match Rank:4
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TGCTGCCACC
-TTTGCCACC
 A C G T C T A G A G T C A C G T A C T G A G T C A G T C C G T A A G T C A G T C
A C G T A C G T C G A T G A C T A C T G A G T C A G T C C T G A A T G C G A T C

CELF2(RRM)/JSL1-CELF2-CLIP-Seq(GSE71264)/Homer

Match Rank:5
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:TGCTGCCACC
--CTGACACY
 A C G T C T A G A G T C A C G T A C T G A G T C A G T C C G T A A G T C A G T C
A C G T A C G T A G T C A C G T C T A G C G T A A G T C C G T A A G T C G A C T

Hic1/MA0739.1/Jaspar

Match Rank:6
Score:0.69
Offset:2
Orientation:forward strand
Alignment:TGCTGCCACC-
--ATGCCAACC
 A C G T C T A G A G T C A C G T A C T G A G T C A G T C C G T A A G T C A G T C A C G T
A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

PB0029.1_Hic1_1/Jaspar

Match Rank:7
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TGCTGCCACC-----
ACTATGCCAACCTACC
 A C G T A C G T C T A G A G T C A C G T A C T G A G T C A G T C C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:8
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TGCTGCCACC
VGCTGWCAVB
 A C G T C T A G A G T C A C G T A C T G A G T C A G T C C G T A A G T C A G T C
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TGCTGCCACC-
---TGACACCT
 A C G T C T A G A G T C A C G T A C T G A G T C A G T C C G T A A G T C A G T C A C G T
A C G T A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T

CRZ1(MacIsaac)/Yeast

Match Rank:10
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TGCTGCCACC
--CAGCCAC-
 A C G T C T A G A G T C A C G T A C T G A G T C A G T C C G T A A G T C A G T C
A C G T A C G T A G T C C G T A A C T G A G T C A G T C C G A T A G T C A C G T