Information for 23-CGGGATTC (Motif 31)

A G T C A C T G A C T G A C T G C G T A A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A C G T A G T C A G T C A G T C A C T G
p-value:1e-10
log p-value:-2.481e+01
Information Content per bp:1.530
Number of Target Sequences with motif72.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif47.0
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets110.9 +/- 58.7bp
Average Position of motif in Background111.1 +/- 56.9bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LYS14/MA0325.1/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-CGGGATTC
CCGGAATT-
 A C G T A G T C A C T G A C T G A C T G C G T A A C G T A C G T A G T C
T A G C A T G C A C T G A C T G C G T A C G T A C G A T G A C T A C G T

dif/Rel/dmmpmm(Bergman)/fly

Match Rank:2
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CGGGATTC---
GGGGAATCCCC
 A G T C A C T G A C T G A C T G C G T A A C G T A C G T A G T C A C G T A C G T A C G T
C T A G A C T G A C T G A C T G C G T A C G T A A G C T A G T C G T A C G A T C G A T C

Rel/dmmpmm(Bergman)/fly

Match Rank:3
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CGGGATTC---
GGGGAATCCCN
 A G T C A C T G A C T G A C T G C G T A A C G T A C G T A G T C A C G T A C G T A C G T
A T C G A C T G A C T G A C T G C G T A G C T A A G C T G A T C G T A C A G T C A T G C

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:4
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CGGGATTC
NGGGATTA
 A G T C A C T G A C T G A C T G C G T A A C G T A C G T A G T C
T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A

ROX1(MacIsaac)/Yeast

Match Rank:5
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CGGGATTC-
GCGGGCTTNT
 A C G T A G T C A C T G A C T G A C T G C G T A A C G T A C G T A G T C A C G T
A T C G T A G C C T A G A C T G A C T G T A G C A G C T A C G T G A C T G A C T

Ptx1/dmmpmm(Noyes_hd)/fly

Match Rank:6
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CGGGATTC---
-GGGATTAACN
 A G T C A C T G A C T G A C T G C G T A A C G T A C G T A G T C A C G T A C G T A C G T
A C G T C T A G C T A G A C T G C G T A A C G T A C G T C G T A T C G A A T G C C A T G

PITX3/MA0714.1/Jaspar

Match Rank:7
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CGGGATTC--
-GGGATTANN
 A G T C A C T G A C T G A C T G C G T A A C G T A C G T A G T C A C G T A C G T
A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G

che-1/MA0260.1/Jaspar

Match Rank:8
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CGGGATTC
--GGTTTC
 A G T C A C T G A C T G A C T G C G T A A C G T A C G T A G T C
A C G T A C G T A T C G A C T G A G C T A C G T A C G T A G T C

MA0260.1_che-1/Jaspar

Match Rank:9
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CGGGATTC
--GGTTTC
 A G T C A C T G A C T G A C T G C G T A A C G T A C G T A G T C
A C G T A C G T A T C G A C T G A G C T A C G T A C G T A G T C

bcd/dmmpmm(Papatsenko)/fly

Match Rank:10
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CGGGATTC--
-NGGATTANN
 A G T C A C T G A C T G A C T G C G T A A C G T A C G T A G T C A C G T A C G T
A C G T T A C G T C A G A C T G T G C A A C G T A G C T C G T A C T A G T A C G