Information for 6-CCTATAGGCG (Motif 5)

A T G C T G A C G C A T G C T A G C A T G T C A C T A G T A C G T A G C T A C G
Reverse Opposite:
A G T C A T C G A T G C G A T C C A G T C G T A C G A T C G T A A C T G T A C G
p-value:1e-126
log p-value:-2.908e+02
Information Content per bp:1.534
Number of Target Sequences with motif2737.0
Percentage of Target Sequences with motif14.28%
Number of Background Sequences with motif2706.8
Percentage of Background Sequences with motif8.96%
Average Position of motif in Targets98.4 +/- 54.9bp
Average Position of motif in Background99.6 +/- 62.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CCTATAGGCG-
NTGCCCTTGGGCGN
 A C G T A C G T A C G T A T G C T G A C G C A T G C T A G C A T G T C A C T A G T A C G T A G C T A C G A C G T
G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G

RPH1/Literature(Harbison)/Yeast

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CCTATAGGCG
CCTTAAGGGG
 A T G C T G A C G C A T G C T A G C A T G T C A C T A G T A C G T A G C T A C G
A G T C A G T C A C G T A C G T C G T A C G T A A C T G A C T G A C T G A C T G

RPH1(MacIsaac)/Yeast

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CCTATAGGCG
CCTTAAGGGG
 A T G C T G A C G C A T G C T A G C A T G T C A C T A G T A C G T A G C T A C G
A G T C A G T C A C G T A C G T C G T A C G T A A C T G A C T G A C T G A C T G

YER130C/MA0423.1/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CCTATAGGCG-
--NATAGGGGN
 A T G C T G A C G C A T G C T A G C A T G T C A C T A G T A C G T A G C T A C G A C G T
A C G T A C G T C G T A G C T A G C A T C G T A A C T G A C T G C T A G T C A G A C G T

SRS7(SRS)/colamp-SRS7-DAP-Seq(GSE60143)/Homer

Match Rank:5
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CCTATAGGCG
DAAACCTATD----
 A C G T A C G T A C G T A C G T A T G C T G A C G C A T G C T A G C A T G T C A C T A G T A C G T A G C T A C G
C G A T C T G A C G T A T C G A A G T C A G T C A C G T C G T A A G C T C G T A A C G T A C G T A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CCTATAGGCG
TGCCCCCGGGCA
 A C G T A C G T A T G C T G A C G C A T G C T A G C A T G T C A C T A G T A C G T A G C T A C G
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A

TFAP2B/MA0811.1/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CCTATAGGCG
TGCCCCAGGGCA
 A C G T A C G T A T G C T G A C G C A T G C T A G C A T G T C A C T A G T A C G T A G C T A C G
G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A

PB0180.1_Sp4_2/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CCTATAGGCG-------
--CAAAGGCGTGGCCAG
 A T G C T G A C G C A T G C T A G C A T G T C A C T A G T A C G T A G C T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CCTATAGGCG-
TCACCTCTGGGCAG
 A C G T A C G T A C G T A T G C T G A C G C A T G C T A G C A T G T C A C T A G T A C G T A G C T A C G A C G T
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

TFAP2C/MA0524.2/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CCTATAGGCG
TGCCCTNGGGCA
 A C G T A C G T A T G C T G A C G C A T G C T A G C A T G T C A C T A G T A C G T A G C T A C G
G A C T T A C G A T G C G A T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A