Information for 12-HCGAATGC (Motif 10)

G C T A A G T C A C T G G T C A C G T A C G A T C T A G G T A C
Reverse Opposite:
A C T G A G T C C G T A C G A T C A G T A G T C A C T G C G A T
p-value:1e-35
log p-value:-8.119e+01
Information Content per bp:1.794
Number of Target Sequences with motif1290.0
Percentage of Target Sequences with motif17.07%
Number of Background Sequences with motif5007.4
Percentage of Background Sequences with motif12.14%
Average Position of motif in Targets100.8 +/- 57.8bp
Average Position of motif in Background100.3 +/- 66.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FUS3/MA0565.1/Jaspar

Match Rank:1
Score:0.83
Offset:1
Orientation:forward strand
Alignment:HCGAATGC--
-CGCATGCGC
 G C T A A G T C A C T G G T C A C G T A C G A T C T A G G T A C A C G T A C G T
A C G T G A T C A T C G G T A C C G T A C A G T A C T G A T G C C T A G A T G C

TEC1(MacIsaac)/Yeast

Match Rank:2
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:HCGAATGC-
-AGAATGTG
 G C T A A G T C A C T G G T C A C G T A C G A T C T A G G T A C A C G T
A C G T T C G A C T A G C T G A C T G A C A G T C T A G G A C T T C A G

ABI3/MA0564.1/Jaspar

Match Rank:3
Score:0.73
Offset:0
Orientation:forward strand
Alignment:HCGAATGC-
CTGCATGCA
 G C T A A G T C A C T G G T C A C G T A C G A T C T A G G T A C A C G T
A G T C A G C T A T C G A T G C C G T A A C G T A C T G T A G C G C T A

EIF-2ALPHA(S1)/Drosophila_melanogaster-RNCMPT00273-PBM/HughesRNA

Match Rank:4
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:HCGAATGC-
--GCATGCT
 G C T A A G T C A C T G G T C A C G T A C G A T C T A G G T A C A C G T
A C G T A C G T A C T G A G T C C G T A A C G T A C T G A G T C C G A T

RBFOX1(RRM)/Homo_sapiens-RNCMPT00168-PBM/HughesRNA

Match Rank:5
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:HCGAATGC-
--GCATGCA
 G C T A A G T C A C T G G T C A C G T A C G A T C T A G G T A C A C G T
A C G T A C G T A C T G A G T C C G T A A C G T A C T G A G T C C G T A

RBFox2(?)/Heart-RBFox2-CLIP-Seq(GSE57926)/Homer

Match Rank:6
Score:0.71
Offset:1
Orientation:forward strand
Alignment:HCGAATGC-
-TGCATGCA
 G C T A A G T C A C T G G T C A C G T A C G A T C T A G G T A C A C G T
A C G T C G A T C T A G G A T C G C T A A G C T C T A G G A T C C G T A

TARDBP(RRM)/Homo_sapiens-RNCMPT00076-PBM/HughesRNA

Match Rank:7
Score:0.71
Offset:1
Orientation:forward strand
Alignment:HCGAATGC-
-NGAATGAN
 G C T A A G T C A C T G G T C A C G T A C G A T C T A G G T A C A C G T
A C G T C G A T A C T G C T G A C G T A A C G T A C T G C G T A C T A G

TEC1/TEC1_YPD/[](Harbison)/Yeast

Match Rank:8
Score:0.69
Offset:0
Orientation:forward strand
Alignment:HCGAATGC
AGGAATG-
 G C T A A G T C A C T G G T C A C G T A C G A T C T A G G T A C
C T G A T C A G C A T G C T G A G T C A C G A T C T A G A C G T

A2BP1(RRM)/Drosophila_melanogaster-RNCMPT00123-PBM/HughesRNA

Match Rank:9
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:HCGAATGC--
--GCATGCAN
 G C T A A G T C A C T G G T C A C G T A C G A T C T A G G T A C A C G T A C G T
A C G T A C G T A C T G A G T C C G T A A C G T A C T G A G T C C G T A G A T C

FOX-1(RRM)/Caenorhabditis_elegans-RNCMPT00017-PBM/HughesRNA

Match Rank:10
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:HCGAATGC-
--TCATGCA
 G C T A A G T C A C T G G T C A C G T A C G A T C T A G G T A C A C G T
A C G T A C G T A C G T A G T C C G T A A C G T A C T G A G T C C G T A