Information for 16-KCGTTYTTTT (Motif 16)

A C T G A T G C A C T G A C G T A C G T A G C T C G A T C A G T G C A T C A G T
Reverse Opposite:
G T C A C G T A G T C A G C T A T C G A T G C A G T C A A G T C A T C G T G A C
p-value:1e-21
log p-value:-4.902e+01
Information Content per bp:1.575
Number of Target Sequences with motif608.0
Percentage of Target Sequences with motif8.05%
Number of Background Sequences with motif2221.7
Percentage of Background Sequences with motif5.39%
Average Position of motif in Targets96.7 +/- 58.6bp
Average Position of motif in Background100.4 +/- 65.0bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Lm_0254(RRM)/Leishmania_major-RNCMPT00254-PBM/HughesRNA

Match Rank:1
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:KCGTTYTTTT
TCGTTCN---
 A C T G A T G C A C T G A C G T A C G T A G C T C G A T C A G T G C A T C A G T
A C G T A G T C A C T G A C G T A C G T A G T C C G A T A C G T A C G T A C G T

Tp_0225(RRM)/Thalassiosira_pseudonana-RNCMPT00225-PBM/HughesRNA

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:KCGTTYTTTT
GCGTGTT---
 A C T G A T G C A C T G A C G T A C G T A G C T C G A T C A G T G C A T C A G T
C T A G A G T C A C T G A G C T A T C G A C G T C G A T A C G T A C G T A C G T

hb/dmmpmm(Noyes)/fly

Match Rank:3
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:KCGTTYTTTT---
-TGTTTTTTTNGT
 A C T G A T G C A C T G A C G T A C G T A G C T C G A T C A G T G C A T C A G T A C G T A C G T A C G T
A C G T G A C T T C A G C A G T A C G T A C G T C A G T A G C T A G C T A C G T A C T G A C T G C A G T

RBP1(RRM)/Drosophila_melanogaster-RNCMPT00058-PBM/HughesRNA

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:KCGTTYTTTT
TCGTTGT---
 A C T G A T G C A C T G A C G T A C G T A G C T C G A T C A G T G C A T C A G T
A G C T A G T C A C T G A C G T A C G T A C T G C G A T A C G T A C G T A C G T

PH0044.1_Homez/Jaspar

Match Rank:5
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------KCGTTYTTTT-
AAAACATCGTTTTTAAG
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A C T G A C G T A C G T A G C T C G A T C A G T G C A T C A G T A C G T
C G T A G C A T G C T A G C T A T G A C G C T A A C G T G T A C A C T G C G A T C G A T G C A T G A C T A G C T G C T A C T G A C T A G

UPC2/MA0411.1/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:KCGTTYTTTT
TCGTATA---
 A C T G A T G C A C T G A C G T A C G T A G C T C G A T C A G T G C A T C A G T
A G C T A G T C A C T G A C G T C G T A G A C T T C G A A C G T A C G T A C G T

CG33714(RRM)/Drosophila_melanogaster-RNCMPT00009-PBM/HughesRNA

Match Rank:7
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--KCGTTYTTTT
NGGCGTG-----
 A C G T A C G T A C T G A T G C A C T G A C G T A C G T A G C T C G A T C A G T G C A T C A G T
A T C G A T C G A C T G A G T C A C T G A G C T A C T G A C G T A C G T A C G T A C G T A C G T

STB5(MacIsaac)/Yeast

Match Rank:8
Score:0.64
Offset:1
Orientation:forward strand
Alignment:KCGTTYTTTT-
-CGGTGTTATA
 A C T G A T G C A C T G A C G T A C G T A G C T C G A T C A G T G C A T C A G T A C G T
A C G T A G T C A C T G A T C G C A G T A T C G G A C T C G A T C G T A G C A T C G T A

Unknown3/Arabidopsis-Promoters/Homer

Match Rank:9
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:KCGTTYTTTT
CCGGTTTART
 A C T G A T G C A C T G A C G T A C G T A G C T C G A T C A G T G C A T C A G T
G A T C A T G C A T C G C A T G A C G T G A C T G A C T C T G A C T G A G C A T

ROX1(MacIsaac)/Yeast

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:KCGTTYTTTT
GCGGGCTTNT
 A C T G A T G C A C T G A C G T A C G T A G C T C G A T C A G T G C A T C A G T
A T C G T A G C C T A G A C T G A C T G T A G C A G C T A C G T G A C T G A C T