Information for 21-CGGTCGCAATTC (Motif 19)

A G T C A C T G A C T G A C G T A G T C A C T G A G T C C G T A C G T A A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A C G T A C G T A C T G A G T C A C T G C G T A A G T C A G T C A C T G
p-value:1e-14
log p-value:-3.225e+01
Information Content per bp:1.530
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif0.13%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets112.9 +/- 31.0bp
Average Position of motif in Background111.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RPN4(MacIsaac)/Yeast

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CGGTCGCAATTC
CGGTGGCAAAA-
 A G T C A C T G A C T G A C G T A G T C A C T G A G T C C G T A C G T A A C G T A C G T A G T C
T A G C C T A G A T C G A G C T C T A G A T C G G T A C C T G A C G T A T G C A G C T A A C G T

kni/dmmpmm(Pollard)/fly

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CGGTCGCAATTC
-GATCTCATTT-
 A G T C A C T G A C T G A C G T A G T C A C T G A G T C C G T A C G T A A C G T A C G T A G T C
A C G T T A C G C G T A A C G T A G T C A C G T G T A C C G T A C G A T A C G T A G C T A C G T

RPN4/RPN4_H2O2Lo/[](Harbison)/Yeast

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CGGTCGCAATTC
-GGTGGCAAA--
 A G T C A C T G A C T G A C G T A G T C A C T G A G T C C G T A C G T A A C G T A C G T A G T C
A C G T C T A G T A C G G A C T C T A G C T A G G T A C C T G A C G T A T G C A A C G T A C G T

byn/dmmpmm(Pollard)/fly

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CGGTCGCAATTC
---TCGCACTT-
 A G T C A C T G A C T G A C G T A G T C A C T G A G T C C G T A C G T A A C G T A C G T A G T C
A C G T A C G T A C G T C G A T G A T C C A T G A G T C C T G A G T A C G C A T C G A T A C G T

M1BP(Zf)/S2R+-M1BP-ChIP-Seq(GSE49842)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CGGTCGCAATTC
ACGGTCACACTG-
 A C G T A G T C A C T G A C T G A C G T A G T C A C T G A G T C C G T A C G T A A C G T A C G T A G T C
T C G A A G T C T C A G C A T G A G C T G T A C G T C A A G T C C G T A A G T C G A C T C T A G A C G T

At5g08750(C3H)/col-At5g08750-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CGGTCGCAATTC
YAGCCGCAAHWN
 A G T C A C T G A C T G A C G T A G T C A C T G A G T C C G T A C G T A A C G T A C G T A G T C
G A C T T G C A C T A G G A T C A G T C C T A G A G T C G C T A C G T A G C T A G C T A G C A T

Med/dmmpmm(SeSiMCMC)/fly

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CGGTCGCAATTC
CACGCGCAGC--
 A G T C A C T G A C T G A C G T A G T C A C T G A G T C C G T A C G T A A C G T A C G T A G T C
A T G C T C G A A T C G A T C G A T G C A T C G A G T C G T C A C T A G A G C T A C G T A C G T

odd/dmmpmm(Noyes)/fly

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CGGTCGCAATTC
AACAGTAGCA----
 A C G T A C G T A G T C A C T G A C T G A C G T A G T C A C T G A G T C C G T A C G T A A C G T A C G T A G T C
G T C A T G C A A G T C T C G A C T A G C A G T C G T A A C T G A G T C T G C A A C G T A C G T A C G T A C G T

Adf1/dmmpmm(Pollard)/fly

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CGGTCGCAATTC
CGCGGTCG------
 A C G T A C G T A G T C A C T G A C T G A C G T A G T C A C T G A G T C C G T A C G T A A C G T A C G T A G T C
A G T C A C T G A G T C C T A G C T A G A G C T A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T

CG7903(RRM)/Drosophila_melanogaster-RNCMPT00144-PBM/HughesRNA

Match Rank:10
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CGGTCGCAATTC
---CCGCAAN--
 A G T C A C T G A C T G A C G T A G T C A C T G A G T C C G T A C G T A A C G T A C G T A G T C
A C G T A C G T A C G T A G T C A G T C A C T G A G T C C G T A C G T A C T A G A C G T A C G T