Information for 3-AGGGGGCGCTGT (Motif 2)

C T G A A T C G C T A G A C T G T C A G C A T G G T A C C T A G A T G C G A C T T A C G A G C T
Reverse Opposite:
T C G A A T G C C T G A A T C G G A T C C A T G G T A C A G T C T G A C G A T C T A G C G A C T
p-value:1e-445
log p-value:-1.026e+03
Information Content per bp:1.686
Number of Target Sequences with motif1844.0
Percentage of Target Sequences with motif24.40%
Number of Background Sequences with motif3096.4
Percentage of Background Sequences with motif7.51%
Average Position of motif in Targets101.4 +/- 46.9bp
Average Position of motif in Background102.6 +/- 65.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF/MA0531.1/Jaspar

Match Rank:1
Score:0.80
Offset:-5
Orientation:forward strand
Alignment:-----AGGGGGCGCTGT
CCGCTAGATGGCGCC--
 A C G T A C G T A C G T A C G T A C G T C T G A A T C G C T A G A C T G T C A G C A T G G T A C C T A G A T G C G A C T T A C G A G C T
A T G C G T A C T C A G T G A C G A C T C T G A C T A G C T G A A C G T A C T G C A T G G A T C C A T G G A T C G A T C A C G T A C G T

RAP2-10/MA0980.1/Jaspar

Match Rank:2
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:AGGGGGCGCTGT
-GGCGGCGC---
 C T G A A T C G C T A G A C T G T C A G C A T G G T A C C T A G A T G C G A C T T A C G A G C T
A C G T C T A G T A C G G T A C T A C G A T C G G A T C C A T G T A G C A C G T A C G T A C G T

RAP2-6/MA1052.1/Jaspar

Match Rank:3
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:AGGGGGCGCTGT
-GGCGGCGC---
 C T G A A T C G C T A G A C T G T C A G C A T G G T A C C T A G A T G C G A C T T A C G A G C T
A C G T C A T G C A T G A G T C A C T G A T C G A G T C C A T G A T G C A C G T A C G T A C G T

ERF109/MA1053.1/Jaspar

Match Rank:4
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:AGGGGGCGCTGT
-GGCGGCGC---
 C T G A A T C G C T A G A C T G T C A G C A T G G T A C C T A G A T G C G A C T T A C G A G C T
A C G T C A T G C T A G T A G C C A T G A T C G A T G C A C T G A T G C A C G T A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:5
Score:0.76
Offset:-4
Orientation:reverse strand
Alignment:----AGGGGGCGCTGT-
NNNAAGGGGGCGGGNNN
 A C G T A C G T A C G T A C G T C T G A A T C G C T A G A C T G T C A G C A T G G T A C C T A G A T G C G A C T T A C G A G C T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

CRF4/MA0976.1/Jaspar

Match Rank:6
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:AGGGGGCGCTGT
-GGCGGCGC---
 C T G A A T C G C T A G A C T G T C A G C A T G G T A C C T A G A T G C G A C T T A C G A G C T
A C G T A C T G C T A G A T G C A C T G A T C G A G T C A C T G A T G C A C G T A C G T A C G T

RPN4/MA0373.1/Jaspar

Match Rank:7
Score:0.74
Offset:1
Orientation:forward strand
Alignment:AGGGGGCGCTGT
-GGTGGCG----
 C T G A A T C G C T A G A C T G T C A G C A T G G T A C C T A G A T G C G A C T T A C G A G C T
A C G T C T A G A C T G A C G T A C T G A C T G A G T C C T A G A C G T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.74
Offset:-6
Orientation:reverse strand
Alignment:------AGGGGGCGCTGT--
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T C G C T A G A C T G T C A G C A T G G T A C C T A G A T G C G A C T T A C G A G C T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

abi4/MA0123.1/Jaspar

Match Rank:9
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:AGGGGGCGCTGT
-GGGGGCACCG-
 C T G A A T C G C T A G A C T G T C A G C A T G G T A C C T A G A T G C G A C T T A C G A G C T
A C G T T C A G T C A G T A C G T C A G A T C G A T G C T C G A A T G C A G T C A C T G A C G T

RAP2-3/MA1051.1/Jaspar

Match Rank:10
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:AGGGGGCGCTGT
-GGCGGCGC---
 C T G A A T C G C T A G A C T G T C A G C A T G G T A C C T A G A T G C G A C T T A C G A G C T
A C G T C A T G C A T G G T A C A C T G A T C G A G T C C A T G A T G C A C G T A C G T A C G T