Information for 21-CGACGCAGTT (Motif 20)

A G T C A C T G C T G A A G T C A T C G A G T C C G T A A C T G A C G T A C G T
Reverse Opposite:
C G T A C G T A A G T C C G A T C T A G A T G C A C T G A G C T A G T C A C T G
p-value:1e-13
log p-value:-3.101e+01
Information Content per bp:1.895
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif0.30%
Number of Background Sequences with motif15.7
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets95.6 +/- 52.3bp
Average Position of motif in Background96.0 +/- 52.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0131.1_Gmeb1_2/Jaspar

Match Rank:1
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----CGACGCAGTT--
TGGGCGACGTCGTTAA
 A C G T A C G T A C G T A C G T A G T C A C T G C T G A A G T C A T C G A G T C C G T A A C T G A C G T A C G T A C G T A C G T
C A G T C A T G T C A G A C T G G T A C T C A G G C T A T A G C A C T G C A G T A G T C C A T G G A C T A G C T G T C A G C T A

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CGACGCAGTT
TGACCTARTT
 A G T C A C T G C T G A A G T C A T C G A G T C C G T A A C T G A C G T A C G T
A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

Unknown2/Arabidopsis-Promoters/Homer

Match Rank:3
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CGACGCAGTT--
AAACGACGTCGTTTT
 A C G T A C G T A C G T A G T C A C T G C T G A A G T C A T C G A G T C C G T A A C T G A C G T A C G T A C G T A C G T
G C T A G C T A T G C A A G T C C T A G C T G A G A T C C T A G G A C T G A T C C T A G A C G T C G A T C G A T G A C T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CGACGCAGTT---
TTGACCTANTTATN
 A C G T A G T C A C T G C T G A A G T C A T C G A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

RBM42(RRM)/Homo_sapiens-RNCMPT00151-PBM/HughesRNA

Match Rank:5
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CGACGCAGTT
---CTTAGTT
 A G T C A C T G C T G A A G T C A T C G A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A G T C C A G T A C G T C G T A A C T G A C G T A C G T

CBF4(AP2EREBP)/colamp-CBF4-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CGACGCAGTT--
NRCCGACDWNNNNNN
 A C G T A C G T A C G T A G T C A C T G C T G A A G T C A T C G A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A G C T C T A G A G T C A G T C A C T G C G T A A G T C C T G A G C A T G C T A C T G A G C A T G C A T C G A T G C A T

Rbm4.3(RRM)/Danio_rerio-RNCMPT00248-PBM/HughesRNA

Match Rank:7
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CGACGCAGTT
NACGACGA----
 A C G T A C G T A G T C A C T G C T G A A G T C A T C G A G T C C G T A A C T G A C G T A C G T
C T G A C T G A A G T C A C T G C T G A A G T C A C T G G T C A A C G T A C G T A C G T A C G T

RSF1(RRM)/Drosophila_melanogaster-RNCMPT00061-PBM/HughesRNA

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CGACGCAGTT
ACGACGA----
 A C G T A G T C A C T G C T G A A G T C A T C G A G T C C G T A A C T G A C G T A C G T
C G T A A G T C A C T G C G T A A G T C A C T G T C G A A C G T A C G T A C G T A C G T

SRSF7(RRM,Znf)/Homo_sapiens-RNCMPT00073-PBM/HughesRNA

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CGACGCAGTT
GACGACGN----
 A C G T A C G T A G T C A C T G C T G A A G T C A T C G A G T C C G T A A C T G A C G T A C G T
C T A G C G T A A G T C A C T G C G T A A G T C C T A G C T A G A C G T A C G T A C G T A C G T

Rbm42(RRM)/Xenopus_tropicalis-RNCMPT00282-PBM/HughesRNA

Match Rank:10
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CGACGCAGTT-
---NGTAGTTG
 A G T C A C T G C T G A A G T C A T C G A G T C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T G A T C A C T G A C G T C G T A A C T G A C G T C G A T A T C G