Information for 22-AKATGTCGTA (Motif 21)

C T G A C A G T C G T A C A G T A C T G A C G T A G T C A C T G A C G T G T C A
Reverse Opposite:
C A G T G T C A A G T C A C T G G T C A G T A C G T C A C G A T G T C A A G C T
p-value:1e-11
log p-value:-2.538e+01
Information Content per bp:1.788
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif0.20%
Number of Background Sequences with motif7.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets147.3 +/- 55.2bp
Average Position of motif in Background73.7 +/- 43.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0032.1_IRC900814_1/Jaspar

Match Rank:1
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---AKATGTCGTA---
GNNATTTGTCGTAANN
 A C G T A C G T A C G T C T G A C A G T C G T A C A G T A C T G A C G T A G T C A C T G A C G T G T C A A C G T A C G T A C G T
T C A G G A T C G C A T C G T A C G A T C G A T G A C T A C T G G A C T A G T C A C T G C A G T T C G A C T G A G C T A G C A T

UPC2/MA0411.1/Jaspar

Match Rank:2
Score:0.76
Offset:5
Orientation:reverse strand
Alignment:AKATGTCGTA--
-----TCGTATA
 C T G A C A G T C G T A C A G T A C T G A C G T A G T C A C T G A C G T G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A G T C A C T G A C G T C G T A G A C T T C G A

RBM45(RRM)/Homo_sapiens-RNCMPT00241-PBM/HughesRNA

Match Rank:3
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:AKATGTCGTA
---TGTCGTC
 C T G A C A G T C G T A C A G T A C T G A C G T A G T C A C T G A C G T G T C A
A C G T A C G T A C G T A C G T A C T G A G C T G T A C A T C G A C G T A G T C

RBM3(RRM)/Homo_sapiens-RNCMPT00050-PBM/HughesRNA

Match Rank:4
Score:0.68
Offset:5
Orientation:reverse strand
Alignment:AKATGTCGTA--
-----TCGTATC
 C T G A C A G T C G T A C A G T A C T G A C G T A G T C A C T G A C G T G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T A C A C T G A C G T G T C A A G C T A G T C

PB0136.1_IRC900814_2/Jaspar

Match Rank:5
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---AKATGTCGTA---
ATGGAAAGTCGTAAAA
 A C G T A C G T A C G T C T G A C A G T C G T A C A G T A C T G A C G T A G T C A C T G A C G T G T C A A C G T A C G T A C G T
C T G A A G C T A C T G C T A G C T G A T C G A G T C A A C T G G A C T A G T C C A T G A C G T C T G A C G T A T C G A G C T A

PH0066.1_Hoxc11/Jaspar

Match Rank:6
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AKATGTCGTA------
TAAAGTCGTAAAATAG
 C T G A C A G T C G T A C A G T A C T G A C G T A G T C A C T G A C G T G T C A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C T G A C G T A C T G A T C A G A G C T G A T C C T A G A C G T C G T A C G T A C G T A G C T A G A C T C T G A C A T G

PH0065.1_Hoxc10/Jaspar

Match Rank:7
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AKATGTCGTA------
TAAAGTCGTAAAACGT
 C T G A C A G T C G T A C A G T A C T G A C G T A G T C A C T G A C G T G T C A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C G T A C G T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C A T C G A C G T

Crem/MA0609.1/Jaspar

Match Rank:8
Score:0.68
Offset:1
Orientation:forward strand
Alignment:AKATGTCGTA-
-TATGACGTAA
 C T G A C A G T C G T A C A G T A C T G A C G T A G T C A C T G A C G T G T C A A C G T
A C G T A C G T C T G A A C G T A C T G C G T A A G T C A C T G A C G T G T C A C G T A

SKO1(MacIsaac)/Yeast

Match Rank:9
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:AKATGTCGTA
--ATGACGTA
 C T G A C A G T C G T A C A G T A C T G A C G T A G T C A C T G A C G T G T C A
A C G T A C G T C T G A A G C T A C T G C T G A A G T C C T A G G A C T C T G A

PH0047.1_Hoxa11/Jaspar

Match Rank:10
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AKATGTCGTA------
TAAAGTCGTAAAACAT
 C T G A C A G T C G T A C A G T A C T G A C G T A G T C A C T G A C G T G T C A A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C T G A G C T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C C T G A A C G T