Information for 24-TCAAGAAGCC (Motif 24)

A C G T A G T C C G T A C G T A A C T G C G T A C G T A A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A C G T A C G T A G T C A C G T A C G T A C T G C G T A
p-value:1e-6
log p-value:-1.588e+01
Information Content per bp:1.530
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.09%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets100.6 +/- 44.7bp
Average Position of motif in Background143.3 +/- 32.5bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

che-1/MA0260.1/Jaspar

Match Rank:1
Score:0.71
Offset:4
Orientation:forward strand
Alignment:TCAAGAAGCC
----GAAACC
 A C G T A G T C C G T A C G T A A C T G C G T A C G T A A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C T G C G T A C G T A C T G A A G T C A T G C

MA0260.1_che-1/Jaspar

Match Rank:2
Score:0.71
Offset:4
Orientation:forward strand
Alignment:TCAAGAAGCC
----GAAACC
 A C G T A G T C C G T A C G T A A C T G C G T A C G T A A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C T G C G T A C G T A C T G A A G T C A T G C

TRA2(RRM)/Drosophila_melanogaster-RNCMPT00078-PBM/HughesRNA

Match Rank:3
Score:0.71
Offset:1
Orientation:forward strand
Alignment:TCAAGAAGCC
-GAAGAAG--
 A C G T A G T C C G T A C G T A A C T G C G T A C G T A A C T G A G T C A G T C
A C G T T C A G C G T A C T G A A T C G C G T A C G T A A T C G A C G T A C G T

REF2(RRM)/Drosophila_melanogaster-RNCMPT00059-PBM/HughesRNA

Match Rank:4
Score:0.69
Offset:3
Orientation:forward strand
Alignment:TCAAGAAGCC
---AGAAGGC
 A C G T A G T C C G T A C G T A A C T G C G T A C G T A A C T G A G T C A G T C
A C G T A C G T A C G T C G T A A C T G C G T A C G T A C T A G T C A G G T A C

SNRNP70(RRM)/Homo_sapiens-RNCMPT00070-PBM/HughesRNA

Match Rank:5
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TCAAGAAGCC
GATCAAG-----
 A C G T A C G T A C G T A G T C C G T A C G T A A C T G C G T A C G T A A C T G A G T C A G T C
C T A G C G T A A C G T A G T C C G T A C G T A C T A G A C G T A C G T A C G T A C G T A C G T

HSF21(HSF)/col-HSF21-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TCAAGAAGCC---
CTTCTAGAAGMTTYW
 A C G T A C G T A C G T A G T C C G T A C G T A A C T G C G T A C G T A A C T G A G T C A G T C A C G T A C G T A C G T
A T G C G C A T C G A T G A T C A G C T C T G A A C T G C G T A C G T A T C A G T G A C C G A T G C A T G A T C C G A T

SNRNP70K(RRM)/Drosophila_melanogaster-RNCMPT00143-PBM/HughesRNA

Match Rank:7
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TCAAGAAGCC
GATCAAGA----
 A C G T A C G T A C G T A G T C C G T A C G T A A C T G C G T A C G T A A C T G A G T C A G T C
C T A G C G T A A C G T A G T C C G T A G C T A A C T G G T C A A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:8
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:TCAAGAAGCC
---NGAAGC-
 A C G T A G T C C G T A C G T A A C T G C G T A C G T A A C T G A G T C A G T C
A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T

GCR1(MacIsaac)/Yeast

Match Rank:9
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TCAAGAAGCC-
--TGGAAGCCC
 A C G T A G T C C G T A C G T A A C T G C G T A C G T A A C T G A G T C A G T C A C G T
A C G T A C G T C G A T A C T G C T A G C G T A C G T A A C T G G A T C T G A C T A G C

HSFB3(HSF)/colamp-HSFB3-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TCAAGAAGCC----
TTCTAGAAGMTTHTW
 A C G T A C G T A G T C C G T A C G T A A C T G C G T A C G T A A C T G A G T C A G T C A C G T A C G T A C G T A C G T
G C A T A C G T A G T C A G C T C T G A A C T G C G T A C G T A T A C G T G A C G C A T G C A T G A T C G C A T C G T A