Information for 7-AKAGGGCRGT (Motif 4)

G T C A A C G T T G C A C T A G A C T G T C A G T G A C C T A G C A T G G A C T
Reverse Opposite:
C T G A G T A C G A T C A C T G A G T C T G A C G A T C A C G T T G C A C A G T
p-value:1e-118
log p-value:-2.739e+02
Information Content per bp:1.459
Number of Target Sequences with motif621.0
Percentage of Target Sequences with motif8.22%
Number of Background Sequences with motif1157.1
Percentage of Background Sequences with motif2.80%
Average Position of motif in Targets102.8 +/- 54.7bp
Average Position of motif in Background98.5 +/- 60.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ABI4(1)(AP2/EREBP)/Zea mays/AthaMap

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AKAGGGCRGT-
-NGGGGCGGTG
 G T C A A C G T T G C A C T A G A C T G T C A G T G A C C T A G C A T G G A C T A C G T
A C G T A T C G A T C G A T C G A C T G A C T G A G T C A C T G A C T G A G C T C T A G

TBP3(MYBrelated)/col-TBP3-DAP-Seq(GSE60143)/Homer

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AKAGGGCRGT
VYTAGGGCAN-
 A C G T G T C A A C G T T G C A C T A G A C T G T C A G T G A C C T A G C A T G G A C T
T C A G G A C T A C G T C G T A A C T G A C T G A C T G A G T C C G T A G T C A A C G T

btd/MA0443.1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AKAGGGCRGT
AGGGGGCGGA
 G T C A A C G T T G C A C T A G A C T G T C A G T G A C C T A G C A T G G A C T
C T G A C T A G C A T G C T A G A C T G A C T G G T A C A C T G A C T G C T G A

PB0076.1_Sp4_1/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----AKAGGGCRGT---
NNNAAGGGGGCGGGNNN
 A C G T A C G T A C G T A C G T G T C A A C G T T G C A C T A G A C T G T C A G T G A C C T A G C A T G G A C T A C G T A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

THAP1/MA0597.1/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AKAGGGCRGT
TNNGGGCAG-
 G T C A A C G T T G C A C T A G A C T G T C A G T G A C C T A G C A T G G A C T
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:6
Score:0.61
Offset:4
Orientation:forward strand
Alignment:AKAGGGCRGT--
----GGCVGTTR
 G T C A A C G T T G C A C T A G A C T G T C A G T G A C C T A G C A T G G A C T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A

At1g36060(AP2EREBP)/colamp-At1g36060-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AKAGGGCRGT-
NNWWKGTCGGTG
 A C G T G T C A A C G T T G C A C T A G A C T G T C A G T G A C C T A G C A T G G A C T A C G T
C G T A C G A T C G T A C G A T C A T G A C T G C G A T A G T C A T C G T C A G G A C T A C T G

At1g19210(AP2EREBP)/colamp-At1g19210-DAP-Seq(GSE60143)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AKAGGGCRGT--
NDTGGTCGGTGD
 G T C A A C G T T G C A C T A G A C T G T C A G T G A C C T A G C A T G G A C T A C G T A C G T
G C T A C G T A C G A T C A T G A C T G G C A T A G T C A C T G A C T G G A C T C T A G C T G A

MYB77(MYB)/col-MYB77-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:AKAGGGCRGT---
---GKRCVGTTRN
 G T C A A C G T T G C A C T A G A C T G T C A G T G A C C T A G C A T G G A C T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G C A T G C T G A G T A C T C G A A C T G A C G T A C G T C T A G C T G A

Run/dmmpmm(Papatsenko)/fly

Match Rank:10
Score:0.60
Offset:4
Orientation:forward strand
Alignment:AKAGGGCRGT-
----GGCGGTG
 G T C A A C G T T G C A C T A G A C T G T C A G T G A C C T A G C A T G G A C T A C G T
A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C T G A C T G A C G T A C T G