Information for 9-TGCARTGC (Motif 6)

G C A T C T A G G A T C C T G A T C G A A G C T C A T G G T A C
Reverse Opposite:
C A T G G T A C T C G A A G C T G A C T C T A G G A T C C G T A
p-value:1e-55
log p-value:-1.266e+02
Information Content per bp:1.643
Number of Target Sequences with motif1220.0
Percentage of Target Sequences with motif16.15%
Number of Background Sequences with motif4234.8
Percentage of Background Sequences with motif10.27%
Average Position of motif in Targets101.1 +/- 50.3bp
Average Position of motif in Background98.9 +/- 58.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.84
Offset:-5
Orientation:reverse strand
Alignment:-----TGCARTGC----
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T A C G T A C G T G C A T C T A G G A T C C T G A T C G A A G C T C A T G G T A C A C G T A C G T A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:2
Score:0.81
Offset:-3
Orientation:forward strand
Alignment:---TGCARTGC-
AGATGCAATCCC
 A C G T A C G T A C G T G C A T C T A G G A T C C T G A T C G A A G C T C A T G G T A C A C G T
T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C

PHD1/MA0355.1/Jaspar

Match Rank:3
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---TGCARTGC
ACCTGCAGCA-
 A C G T A C G T A C G T G C A T C T A G G A T C C T G A T C G A A G C T C A T G G T A C
T G C A T A G C T G A C A G C T A C T G A G T C C T G A A C T G T A G C T G C A A C G T

Pr_0249(RRM)/Phytophthora_ramorum-RNCMPT00249-PBM/HughesRNA

Match Rank:4
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TGCARTGC
TGTGCAA---
 A C G T A C G T G C A T C T A G G A T C C T G A T C G A A G C T C A T G G T A C
G A C T A C T G A C G T A C T G A G T C C G T A C G T A A C G T A C G T A C G T

CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TGCARTGC------------
TGCAGTTCCNNNNNTGGCCA
 G C A T C T A G G A T C C T G A T C G A A G C T C A T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T T A C G G A T C G C T A T C A G G A C T C G A T G T A C G A T C G T C A T C G A T G A C C G T A C T A G G A C T C T A G C T A G G T A C A G T C C G T A

SNF(RRM)/Drosophila_melanogaster-RNCMPT00145-PBM/HughesRNA

Match Rank:6
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TGCARTGC
TGTGCAAT--
 A C G T A C G T G C A T C T A G G A T C C T G A T C G A A G C T C A T G G T A C
G A C T A C T G A C G T A C T G A G T C C G T A C G T A C G A T A C G T A C G T

SOK2/MA0385.1/Jaspar

Match Rank:7
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TGCARTGC
NNCCTGCAGGT-
 A C G T A C G T A C G T A C G T G C A T C T A G G A T C C T G A T C G A A G C T C A T G G T A C
A C G T A C T G A T G C G T A C A C G T C A T G A G T C G C T A A C T G T A C G A C G T A C G T

SNRPA(RRM)/Homo_sapiens-RNCMPT00071-PBM/HughesRNA

Match Rank:8
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TGCARTGC
TGTGCAA---
 A C G T A C G T G C A T C T A G G A T C C T G A T C G A A G C T C A T G G T A C
A G C T A C T G A C G T A C T G A G T C C G T A C G T A A C G T A C G T A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:9
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----TGCARTGC
NATTGTGCAAT--
 A C G T A C G T A C G T A C G T A C G T G C A T C T A G G A T C C T G A T C G A A G C T C A T G G T A C
C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T A C G T A C G T

CST6(MacIsaac)/Yeast

Match Rank:10
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TGCARTGC
TGCATTTN
 G C A T C T A G G A T C C T G A T C G A A G C T C A T G G T A C
A C G T A T C G G T A C C G T A A C G T G A C T A G C T G A T C