Information for 11-CGGTTGCAAT (Motif 10)

G T A C A T C G A C T G A G C T A C G T A C T G T G A C C T G A T C G A G C A T
Reverse Opposite:
C G T A A G C T G A C T A C T G T G A C T G C A T C G A T G A C T A G C C A T G
p-value:1e-43
log p-value:-9.938e+01
Information Content per bp:1.646
Number of Target Sequences with motif504.0
Percentage of Target Sequences with motif4.15%
Number of Background Sequences with motif774.9
Percentage of Background Sequences with motif2.11%
Average Position of motif in Targets102.9 +/- 55.8bp
Average Position of motif in Background96.5 +/- 61.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AFT1/MA0269.1/Jaspar

Match Rank:1
Score:0.73
Offset:-5
Orientation:reverse strand
Alignment:-----CGGTTGCAAT------
CNANNCGGGTGCAATATNNNA
 A C G T A C G T A C G T A C G T A C G T G T A C A T C G A C T G A G C T A C G T A C T G T G A C C T G A T C G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T
A T G C T G A C C G T A G C T A A C G T A T G C C T A G C A T G T C A G G A C T A T C G G A T C T C G A G T C A G C A T G T C A C A G T T A C G G A C T T C G A T G C A

RCS1/RCS1_H2O2Hi/35-RCS1(Harbison)/Yeast

Match Rank:2
Score:0.72
Offset:1
Orientation:forward strand
Alignment:CGGTTGCAAT
-GGGTGCANT
 G T A C A T C G A C T G A G C T A C G T A C T G T G A C C T G A T C G A G C A T
A C G T C T A G A C T G A C T G A G C T C T A G G A T C C T G A C T A G G C A T

RFX1/MA0365.1/Jaspar

Match Rank:3
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CGGTTGCAAT
-GGTTGCCA-
 G T A C A T C G A C T G A G C T A C G T A C T G T G A C C T G A T C G A G C A T
A C G T A T C G A C T G A C G T A C G T C T A G A G T C A G C T C G T A A C G T

RPN4(MacIsaac)/Yeast

Match Rank:4
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CGGTTGCAAT-
CGGTGGCAAAA
 G T A C A T C G A C T G A G C T A C G T A C T G T G A C C T G A T C G A G C A T A C G T
T A G C C T A G A T C G A G C T C T A G A T C G G T A C C T G A C G T A T G C A G C T A

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:5
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CGGTTGCAAT---
-AGATGCAATCCC
 G T A C A T C G A C T G A G C T A C G T A C T G T G A C C T G A T C G A G C A T A C G T A C G T A C G T
A C G T T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C

RPN4/RPN4_H2O2Lo/[](Harbison)/Yeast

Match Rank:6
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CGGTTGCAAT
-GGTGGCAAA
 G T A C A T C G A C T G A G C T A C G T A C T G T G A C C T G A T C G A G C A T
A C G T C T A G T A C G G A C T C T A G C T A G G T A C C T G A C G T A T G C A

PB0055.1_Rfx4_1/Jaspar

Match Rank:7
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CGGTTGCAAT----
NNCGTTGCTATGGNN
 A C G T G T A C A T C G A C T G A G C T A C G T A C T G T G A C C T G A T C G A G C A T A C G T A C G T A C G T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:8
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CGGTTGCAAT----
NCCGTTGCTANGNGN
 A C G T G T A C A T C G A C T G A G C T A C G T A C T G T G A C C T G A T C G A G C A T A C G T A C G T A C G T A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CGGTTGCAAT
NATGTTGCAA-
 A C G T G T A C A T C G A C T G A G C T A C G T A C T G T G A C C T G A T C G A G C A T
C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T

GAMYB(MYB)/Hordeum vulgare/AthaMap

Match Rank:10
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CGGTTGCAAT
GGCGGTTG----
 A C G T A C G T G T A C A T C G A C T G A G C T A C G T A C T G T G A C C T G A T C G A G C A T
A C T G C A G T A G T C A T C G A C T G A C G T A C G T C T A G A C G T A C G T A C G T A C G T