Information for 22-SACACGAT (Motif 18)

A T G C C G T A G A T C C G T A A G T C A C T G C G T A A C G T
Reverse Opposite:
G T C A A C G T A G T C A C T G A C G T C T A G A C G T A T C G
p-value:1e-18
log p-value:-4.192e+01
Information Content per bp:1.872
Number of Target Sequences with motif213.0
Percentage of Target Sequences with motif1.75%
Number of Background Sequences with motif330.4
Percentage of Background Sequences with motif0.90%
Average Position of motif in Targets108.5 +/- 51.6bp
Average Position of motif in Background90.2 +/- 60.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

UPC2/MA0411.1/Jaspar

Match Rank:1
Score:0.80
Offset:0
Orientation:forward strand
Alignment:SACACGAT
TATACGA-
 A T G C C G T A G A T C C G T A A G T C A C T G C G T A A C G T
A G C T C T G A C G A T C G T A A G T C C T A G T C G A A C G T

RBM3(RRM)/Homo_sapiens-RNCMPT00050-PBM/HughesRNA

Match Rank:2
Score:0.78
Offset:0
Orientation:forward strand
Alignment:SACACGAT
GATACGA-
 A T G C C G T A G A T C C G T A A G T C A C T G C G T A A C G T
C T A G C T G A C A G T C G T A G T A C C A T G C G T A A C G T

PH0044.1_Homez/Jaspar

Match Rank:3
Score:0.75
Offset:-4
Orientation:reverse strand
Alignment:----SACACGAT-----
NNTAAAAACGATGTTNT
 A C G T A C G T A C G T A C G T A T G C C G T A G A T C C G T A A G T C A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G A T C G A C T C G A T T C G A C G T A C G T A G C T A G C T A A G T C C A T G C G T A C G A T A C T G C G A T C G A T C G A T G C A T

HNRNPL(RRM)/Homo_sapiens-RNCMPT00091-PBM/HughesRNA

Match Rank:4
Score:0.72
Offset:1
Orientation:forward strand
Alignment:SACACGAT
-ACACAAN
 A T G C C G T A G A T C C G T A A G T C A C T G C G T A A C G T
A C G T C G T A A G T C C G T A G T A C T C G A T C G A T C G A

HMRA1/MA0327.1/Jaspar

Match Rank:5
Score:0.67
Offset:1
Orientation:forward strand
Alignment:SACACGAT
-ACACAAT
 A T G C C G T A G A T C C G T A A G T C A C T G C G T A A C G T
A C G T C T A G A G T C C G T A A G T C C G T A C G T A A C G T

MATA1(MacIsaac)/Yeast

Match Rank:6
Score:0.67
Offset:1
Orientation:forward strand
Alignment:SACACGAT
-ACACAAT
 A T G C C G T A G A T C C G T A A G T C A C T G C G T A A C G T
A C G T C T A G A G T C C G T A A G T C C G T A C G T A A C G T

AT2G15740(C2H2)/col-AT2G15740-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:SACACGAT-----
-HATCGATWHNDH
 A T G C C G T A G A T C C G T A A G T C A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C T A C G T A G C A T A G T C C T A G C G T A G C A T C G A T G A C T A T G C C T A G G C T A

PB0168.1_Sox14_2/Jaspar

Match Rank:8
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--SACACGAT-----
CTCACACAATGGCGC
 A C G T A C G T A T G C C G T A G A T C C G T A A G T C A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

BEAF-32B/dmmpmm(Pollard)/fly

Match Rank:9
Score:0.65
Offset:3
Orientation:forward strand
Alignment:SACACGAT---
---ACGATACT
 A T G C C G T A G A T C C G T A A G T C A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G A G T C A C T G C G T A A C G T C G T A A G C T A C G T

GATA15/MA1016.1/Jaspar

Match Rank:10
Score:0.65
Offset:2
Orientation:forward strand
Alignment:SACACGAT---
--TATGATCAG
 A T G C C G T A G A T C C G T A A G T C A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A G C T C T G A G A C T T C A G C G T A G C A T A T G C C T G A T C A G