Information for 4-ACAGCGCCCCCT (Motif 2)

C T G A A T G C T C G A A T C G G A T C A C T G T G A C A T G C T G A C A G T C A T G C C A G T
Reverse Opposite:
G T C A T A C G T C A G A C T G T A C G A C T G T G A C C T A G A T G C A G C T T A C G A G C T
p-value:1e-735
log p-value:-1.694e+03
Information Content per bp:1.649
Number of Target Sequences with motif2188.0
Percentage of Target Sequences with motif18.01%
Number of Background Sequences with motif1496.9
Percentage of Background Sequences with motif4.07%
Average Position of motif in Targets100.3 +/- 42.9bp
Average Position of motif in Background100.7 +/- 64.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF/MA0531.1/Jaspar

Match Rank:1
Score:0.80
Offset:2
Orientation:reverse strand
Alignment:ACAGCGCCCCCT-----
--GGCGCCATCTAGCGG
 C T G A A T G C T C G A A T C G G A T C A C T G T G A C A T G C T G A C A G T C A T G C C A G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G C T A G G T A C C T A G G T A C A G T C T G C A G A C T A G T C G A C T C T G A A C T G A G T C C A T G T A C G

RAP2-10/MA0980.1/Jaspar

Match Rank:2
Score:0.76
Offset:3
Orientation:forward strand
Alignment:ACAGCGCCCCCT
---GCGCCGCC-
 C T G A A T G C T C G A A T C G G A T C A C T G T G A C A T G C T G A C A G T C A T G C C A G T
A C G T A C G T A C G T A T C G G A T C C T A G T A G C A T G C C A T G A T G C G A T C A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--ACAGCGCCCCCT------
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T C T G A A T G C T C G A A T C G G A T C A C T G T G A C A T G C T G A C A G T C A T G C C A G T A C G T A C G T A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

PB0076.1_Sp4_1/Jaspar

Match Rank:4
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-ACAGCGCCCCCT----
GGTCCCGCCCCCTTCTC
 A C G T C T G A A T G C T C G A A T C G G A T C A C T G T G A C A T G C T G A C A G T C A T G C C A G T A C G T A C G T A C G T A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

RAP2-6/MA1052.1/Jaspar

Match Rank:5
Score:0.75
Offset:3
Orientation:forward strand
Alignment:ACAGCGCCCCCT
---GCGCCGCC-
 C T G A A T G C T C G A A T C G G A T C A C T G T G A C A T G C T G A C A G T C A T G C C A G T
A C G T A C G T A C G T T A C G G T A C C T A G T A G C T G A C C T A G G A T C G T A C A C G T

ERF109/MA1053.1/Jaspar

Match Rank:6
Score:0.74
Offset:3
Orientation:forward strand
Alignment:ACAGCGCCCCCT
---GCGCCGCC-
 C T G A A T G C T C G A A T C G G A T C A C T G T G A C A T G C T G A C A G T C A T G C C A G T
A C G T A C G T A C G T T A C G T G A C A T C G T A G C G T A C A T C G G A T C G T A C A C G T

CRF4/MA0976.1/Jaspar

Match Rank:7
Score:0.73
Offset:3
Orientation:forward strand
Alignment:ACAGCGCCCCCT
---GCGCCGCC-
 C T G A A T G C T C G A A T C G G A T C A C T G T G A C A T G C T G A C A G T C A T G C C A G T
A C G T A C G T A C G T A T C G G T A C A C T G A T G C A G T C A T C G A G T C T G A C A C G T

RPN4/MA0373.1/Jaspar

Match Rank:8
Score:0.72
Offset:4
Orientation:reverse strand
Alignment:ACAGCGCCCCCT
----CGCCACC-
 C T G A A T G C T C G A A T C G G A T C A C T G T G A C A T G C T G A C A G T C A T G C C A G T
A C G T A C G T A C G T A C G T A G T C A C T G A G T C A G T C G T C A A G T C G A T C A C G T

abi4/MA0123.1/Jaspar

Match Rank:9
Score:0.71
Offset:1
Orientation:forward strand
Alignment:ACAGCGCCCCCT
-CGGTGCCCCC-
 C T G A A T G C T C G A A T C G G A T C A C T G T G A C A T G C T G A C A G T C A T G C C A G T
A C G T A G T C C T A G A T C G A G C T T A C G A T G C A G T C A T G C A G T C A G T C A C G T

CTCF/MA0139.1/Jaspar

Match Rank:10
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:ACAGCGCCCCCT--------
-TAGCGCCCCCTGGTGGCCA
 C T G A A T G C T C G A A T C G G A T C A C T G T G A C A T G C T G A C A G T C A T G C C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A