Information for 23-GCTTCATATA (Motif 26)

A C T G A G T C A C G T A C G T A G T C C G T A A C G T C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T C G T A A C G T A C T G C G T A C G T A A C T G A G T C
p-value:1e-8
log p-value:-1.984e+01
Information Content per bp:1.530
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif0.08%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets83.4 +/- 54.1bp
Average Position of motif in Background70.3 +/- 8.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MOT2/MA0379.1/Jaspar

Match Rank:1
Score:0.71
Offset:5
Orientation:forward strand
Alignment:GCTTCATATA
-----ATATA
 A C T G A G T C A C G T A C G T A G T C C G T A A C G T C G T A A C G T C G T A
A C G T A C G T A C G T A C G T A C G T G C T A A C G T C G T A A C G T C G T A

Cf2/dmmpmm(Bergman)/fly

Match Rank:2
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GCTTCATATA-
--TATATATAC
 A C T G A G T C A C G T A C G T A G T C C G T A A C G T C G T A A C G T C G T A A C G T
A C G T A C G T A G C T C T G A G A C T C T G A A G C T T C G A A G C T C T G A A G T C

RBMS3(RRM)/Homo_sapiens-RNCMPT00173-PBM/HughesRNA

Match Rank:3
Score:0.67
Offset:4
Orientation:forward strand
Alignment:GCTTCATATA-
----TATATAN
 A C T G A G T C A C G T A C G T A G T C C G T A A C G T C G T A A C G T C G T A A C G T
A C G T A C G T A C G T A C G T G A C T C G T A A C G T C G T A C G A T C G T A A T C G

Cf2/MA0015.1/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GCTTCATATA-
-NTATATATAC
 A C T G A G T C A C G T A C G T A G T C C G T A A C G T C G T A A C G T C G T A A C G T
A C G T T C A G G A C T C T G A A G C T C T G A A C G T T C G A A G C T C T G A A G T C

SHEP(RRM)/Drosophila_melanogaster-RNCMPT00174-PBM/HughesRNA

Match Rank:5
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GCTTCATATA
---TAATATA
 A C T G A G T C A C G T A C G T A G T C C G T A A C G T C G T A A C G T C G T A
A C G T A C G T A C G T G A C T C G T A C G T A G C A T C G T A C G A T C G T A

RBMS3(RRM)/Homo_sapiens-RNCMPT00057-PBM/HughesRNA

Match Rank:6
Score:0.65
Offset:5
Orientation:forward strand
Alignment:GCTTCATATA--
-----ATATATA
 A C T G A G T C A C G T A C G T A G T C C G T A A C G T C G T A A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A A G C T C G T A A C G T C G T A A C G T G T C A

POL008.1_DCE_S_I/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GCTTCATATA
GCTTCC----
 A C T G A G T C A C G T A C G T A G T C C G T A A C G T C G T A A C G T C G T A
A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T

SHEP(RRM)/Drosophila_melanogaster-RNCMPT00068-PBM/HughesRNA

Match Rank:8
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GCTTCATATA
--TTAATAT-
 A C T G A G T C A C G T A C G T A G T C C G T A A C G T C G T A A C G T C G T A
A C G T A C G T G A C T C G A T G T C A C G T A A C G T C G T A A C G T A C G T

TATA-box/SacCer-Promoters/Homer

Match Rank:9
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GCTTCATATA
BBHWTATATA
 A C T G A G T C A C G T A C G T A G T C C G T A A C G T C G T A A C G T C G T A
A G T C A G T C G A C T G C A T A G C T C G T A A C G T C G T A G C A T G T C A

SHEP(RRM)/Drosophila_melanogaster-RNCMPT00175-PBM/HughesRNA

Match Rank:10
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GCTTCATATA
--TAAATAT-
 A C T G A G T C A C G T A C G T A G T C C G T A A C G T C G T A A C G T C G T A
A C G T A C G T G A C T C G T A G C T A C G T A A C G T C G T A C G A T A C G T