Information for 25-TCAGACATGC (Motif 28)

A C G T A G T C C G T A A C T G C G T A A G T C C G T A A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A C G T A C T G A C G T A G T C A C G T A C T G C G T A
p-value:1e-6
log p-value:-1.564e+01
Information Content per bp:1.530
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif0.09%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets111.8 +/- 61.0bp
Average Position of motif in Background99.2 +/- 42.8bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

pros/dmmpmm(Bergman)/fly

Match Rank:1
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:TCAGACATGC
--AGNCATG-
 A C G T A G T C C G T A A C T G C G T A A G T C C G T A A C G T A C T G A G T C
A C G T A C G T C T G A A C T G G C T A T A G C C T G A C G A T A C T G A C G T

ARF2(ARF)/col-ARF2-DAP-Seq(GSE60143)/Homer

Match Rank:2
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TCAGACATGC
NWKCCGACAA--
 A C G T A C G T A C G T A G T C C G T A A C T G C G T A A G T C C G T A A C G T A C T G A G T C
G C A T G C T A C A G T A T G C G T A C A C T G C G T A A G T C C G T A C G T A A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----TCAGACATGC--
CAAATCCAGACATCACA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A A G T C C G T A A C G T A C T G A G T C A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

sma-4/MA0925.1/Jaspar

Match Rank:4
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TCAGACATGC
NNCCAGACANN-
 A C G T A C G T A C G T A G T C C G T A A C T G C G T A A G T C C G T A A C G T A C T G A G T C
A C T G A G C T G T A C A G T C C G T A A C T G C G T A G T A C C G T A A G T C A C G T A C G T

EIF-2ALPHA(S1)/Drosophila_melanogaster-RNCMPT00273-PBM/HughesRNA

Match Rank:5
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:TCAGACATGC-
----GCATGCT
 A C G T A G T C C G T A A C T G C G T A A G T C C G T A A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C T G A G T C C G A T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TCAGACATGC
CCAGACRSVB
 A C G T A G T C C G T A A C T G C G T A A G T C C G T A A C G T A C T G A G T C
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

ASD-1(RRM)/Caenorhabditis_elegans-RNCMPT00180-PBM/HughesRNA

Match Rank:7
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:TCAGACATGC-
----TCATGCA
 A C G T A G T C C G T A A C T G C G T A A G T C C G T A A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T C A G T A G T C C G T A A C G T A C T G A G T C C G T A

sd/dmmpmm(Bergman)/fly

Match Rank:8
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TCAGACATGC-
--ANAAATNCA
 A C G T A G T C C G T A A C T G C G T A A G T C C G T A A C G T A C T G A G T C A C G T
A C G T A C G T C G T A A C G T C G T A G T A C C G T A A C G T A C G T A G C T C G A T

INO2/INO2_YPD/1-INO4,2-INO2(Harbison)/Yeast

Match Rank:9
Score:0.66
Offset:3
Orientation:forward strand
Alignment:TCAGACATGC
---CACATGC
 A C G T A G T C C G T A A C T G C G T A A G T C C G T A A C G T A C T G A G T C
A C G T A C G T A C G T A T G C G C T A T A G C T C G A C G A T C T A G A T G C

FOX-1(RRM)/Caenorhabditis_elegans-RNCMPT00017-PBM/HughesRNA

Match Rank:10
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:TCAGACATGC-
----TCATGCA
 A C G T A G T C C G T A A C T G C G T A A G T C C G T A A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C T G A G T C C G T A