Information for 16-GCCGCATT (Motif 14)

A C T G T A G C A T G C A C T G A T G C G C T A C A G T C G A T
Reverse Opposite:
C G T A G T C A C G A T T A C G A G T C A T C G A T C G T G A C
p-value:1e-41
log p-value:-9.487e+01
Information Content per bp:1.675
Number of Target Sequences with motif1100.0
Percentage of Target Sequences with motif7.49%
Number of Background Sequences with motif1661.8
Percentage of Background Sequences with motif4.90%
Average Position of motif in Targets101.7 +/- 54.4bp
Average Position of motif in Background97.9 +/- 67.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RRTF1(AP2EREBP)/colamp-RRTF1-DAP-Seq(GSE60143)/Homer

Match Rank:1
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--GCCGCATT--
CCGCCGCHATTT
 A C G T A C G T A C T G T A G C A T G C A C T G A T G C G C T A C A G T C G A T A C G T A C G T
A T G C G T A C A C T G A G T C A G T C A C T G G A T C G T C A C G T A C G A T G C A T C G A T

ERF115(AP2EREBP)/colamp-ERF115-DAP-Seq(GSE60143)/Homer

Match Rank:2
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--GCCGCATT
VCGCCGYMAW
 A C G T A C G T A C T G T A G C A T G C A C T G A T G C G C T A C A G T C G A T
T A G C T G A C A C T G A G T C A G T C C T A G G A T C G T C A C G T A G C A T

ERF8(AP2EREBP)/colamp-ERF8-DAP-Seq(GSE60143)/Homer

Match Rank:3
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-GCCGCATT-
CGCCGYCATW
 A C G T A C T G T A G C A T G C A C T G A T G C G C T A C A G T C G A T A C G T
G T A C A C T G A T G C T G A C C T A G G A C T G T A C C G T A G C A T G C A T

RAP26(AP2EREBP)/colamp-RAP26-DAP-Seq(GSE60143)/Homer

Match Rank:4
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--GCCGCATT--
CCGCCGCCATHD
 A C G T A C G T A C T G T A G C A T G C A C T G A T G C G C T A C A G T C G A T A C G T A C G T
A T G C G T A C C T A G A G T C G T A C C T A G G A T C G T A C C G T A G C A T G C A T C G A T

ABR1(AP2EREBP)/colamp-ABR1-DAP-Seq(GSE60143)/Homer

Match Rank:5
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--GCCGCATT--
CCGCCGCCATTT
 A C G T A C G T A C T G T A G C A T G C A C T G A T G C G C T A C A G T C G A T A C G T A C G T
A G T C T G A C A C T G A G T C G T A C C T A G G A T C G T A C C G T A G C A T G C A T C G A T

At2g33710(AP2EREBP)/colamp-At2g33710-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--GCCGCATT
YMGCCGCMAW
 A C G T A C G T A C T G T A G C A T G C A C T G A T G C G C T A C A G T C G A T
A G T C T G A C A C T G A T G C G T A C C T A G G A T C G T A C C G T A G C A T

STP1/MA0394.1/Jaspar

Match Rank:7
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--GCCGCATT
GCGCCGCA--
 A C G T A C G T A C T G T A G C A T G C A C T G A T G C G C T A C A G T C G A T
T A C G G T A C A C T G A G T C G T A C A C T G A G T C T C G A A C G T A C G T

STP1(MacIsaac)/Yeast

Match Rank:8
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--GCCGCATT
GCGCCGCA--
 A C G T A C G T A C T G T A G C A T G C A C T G A T G C G C T A C A G T C G A T
T A C G G T A C A C T G A G T C G T A C A C T G A G T C T C G A A C G T A C G T

RAP212(AP2EREBP)/col-RAP212-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GCCGCATT---
CGCCGCCATTTT
 A C G T A C T G T A G C A T G C A C T G A T G C G C T A C A G T C G A T A C G T A C G T A C G T
G T A C A C T G A T G C A G T C C T A G G A T C G T A C C T G A G A C T G C A T C G A T G A C T

AT4G18450(AP2EREBP)/col-AT4G18450-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--GCCGCATT
CMGCCGCCAT
 A C G T A C G T A C T G T A G C A T G C A C T G A T G C G C T A C A G T C G A T
A G T C T G A C A C T G A G T C A G T C A C T G A G T C A G T C C G T A G A C T