Information for 14-GCTATAGCACAA (Motif 18)

C A T G G T A C A G C T C G T A A G C T C G T A A C T G G T A C C G T A G T A C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A C G T A C T G A G T C A C G T C T G A A C G T C T G A A C T G G A T C
p-value:1e-28
log p-value:-6.583e+01
Information Content per bp:1.921
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif0.18%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets100.7 +/- 40.6bp
Average Position of motif in Background48.7 +/- 3.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NCU08034(RRM)/Neurospora_crassa-RNCMPT00209-PBM/HughesRNA

Match Rank:1
Score:0.74
Offset:4
Orientation:forward strand
Alignment:GCTATAGCACAA
----TAGCACAN
 C A T G G T A C A G C T C G T A A G C T C G T A A C T G G T A C C G T A G T A C C G T A C G T A
A C G T A C G T A C G T A C G T C G A T C G T A A C T G A G T C C G T A A G T C C T G A T C G A

SNF(RRM)/Drosophila_melanogaster-RNCMPT00145-PBM/HughesRNA

Match Rank:2
Score:0.67
Offset:3
Orientation:forward strand
Alignment:GCTATAGCACAA
---ATTGCACA-
 C A T G G T A C A G C T C G T A A G C T C G T A A C T G G T A C C G T A G T A C C G T A C G T A
A C G T A C G T A C G T G C T A C G A T C G A T A C T G A G T C C G T A A G T C C T G A A C G T

MEC-8(RRM)/Caenorhabditis_elegans-RNCMPT00181-PBM/HughesRNA

Match Rank:3
Score:0.67
Offset:4
Orientation:forward strand
Alignment:GCTATAGCACAA
----NTGCACA-
 C A T G G T A C A G C T C G T A A G C T C G T A A C T G G T A C C G T A G T A C C G T A C G T A
A C G T A C G T A C G T A C G T C G T A C G A T A C T G A G T C C G T A A G T C C G T A A C G T

CPO(RRM)/Drosophila_melanogaster-RNCMPT00133-PBM/HughesRNA

Match Rank:4
Score:0.66
Offset:4
Orientation:forward strand
Alignment:GCTATAGCACAA
----NTGCACA-
 C A T G G T A C A G C T C G T A A G C T C G T A A C T G G T A C C G T A G T A C C G T A C G T A
A C G T A C G T A C G T A C G T C T G A G C A T A C T G A G T C C G T A A G T C C G T A A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:5
Score:0.65
Offset:3
Orientation:forward strand
Alignment:GCTATAGCACAA--
---ATTGCACAATA
 C A T G G T A C A G C T C G T A A G C T C G T A A C T G G T A C C G T A G T A C C G T A C G T A A C G T A C G T
A C G T A C G T A C G T T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A

SNRPA(RRM)/Homo_sapiens-RNCMPT00071-PBM/HughesRNA

Match Rank:6
Score:0.63
Offset:4
Orientation:forward strand
Alignment:GCTATAGCACAA
----TTGCACA-
 C A T G G T A C A G C T C G T A A G C T C G T A A C T G G T A C C G T A G T A C C G T A C G T A
A C G T A C G T A C G T A C G T C G A T C G A T A C T G A G T C C G T A A G T C C T G A A C G T

HMRA1/MA0327.1/Jaspar

Match Rank:7
Score:0.63
Offset:6
Orientation:forward strand
Alignment:GCTATAGCACAA-
------ACACAAT
 C A T G G T A C A G C T C G T A A G C T C G T A A C T G G T A C C G T A G T A C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G T C C G T A A G T C C G T A C G T A A C G T

MATA1(MacIsaac)/Yeast

Match Rank:8
Score:0.63
Offset:6
Orientation:forward strand
Alignment:GCTATAGCACAA-
------ACACAAT
 C A T G G T A C A G C T C G T A A G C T C G T A A C T G G T A C C G T A G T A C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G T C C G T A A G T C C G T A C G T A A C G T

PFI1695c(RRM)/Plasmodium_falciparum-RNCMPT00203-PBM/HughesRNA

Match Rank:9
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GCTATAGCACAA
---CCAGCACA-
 C A T G G T A C A G C T C G T A A G C T C G T A A C T G G T A C C G T A G T A C C G T A C G T A
A C G T A C G T A C G T A G T C A G T C C G T A A C T G A G T C C G T A A G T C C G T A A C G T

MGA1/MA0336.1/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GCTATAGCACAA------
AGGACTATAGAACACTCTAAA
 A C G T A C G T A C G T C A T G G T A C A G C T C G T A A G C T C G T A A C T G G T A C C G T A G T A C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C T A G T A C G T C G A G A T C A C G T C T G A C G A T T G C A C T A G C T G A C G T A A G T C T C G A A G T C C G A T G T A C G C A T C G T A G C T A T G C A