Information for 20-GCAGCTGCTTGG (Motif 24)

A C T G A G T C C T G A A C T G G T A C A C G T A C T G T A G C A C G T A C G T A T C G A C T G
Reverse Opposite:
G T A C A T G C C G T A C G T A A C T G A G T C C G T A A C T G A G T C A G C T C T A G A G T C
p-value:1e-19
log p-value:-4.593e+01
Information Content per bp:1.957
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif0.17%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets89.0 +/- 49.8bp
Average Position of motif in Background77.3 +/- 17.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ascl2/MA0816.1/Jaspar

Match Rank:1
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-GCAGCTGCTTGG
AGCAGCTGCT---
 A C G T A C T G A G T C C T G A A C T G G T A C A C G T A C T G T A G C A C G T A C G T A T C G A C T G
C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:2
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-GCAGCTGCTTGG
CGCAGCTGCG---
 A C G T A C T G A G T C C T G A A C T G G T A C A C G T A C T G T A G C A C G T A C G T A T C G A C T G
T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:3
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---GCAGCTGCTTGG
NNAGCAGCTGCT---
 A C G T A C G T A C G T A C T G A G T C C T G A A C T G G T A C A C G T A C T G T A G C A C G T A C G T A T C G A C T G
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.76
Offset:0
Orientation:forward strand
Alignment:GCAGCTGCTTGG
NCAGCTGCTG--
 A C T G A G T C C T G A A C T G G T A C A C G T A C T G T A G C A C G T A C G T A T C G A C T G
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:5
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:GCAGCTGCTTGG
GCAGCTGTNN--
 A C T G A G T C C T G A A C T G G T A C A C G T A C T G T A G C A C G T A C G T A T C G A C T G
T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:6
Score:0.75
Offset:-5
Orientation:reverse strand
Alignment:-----GCAGCTGCTTGG
NNNNAGCAGCTGCTGAN
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C T G A A C T G G T A C A C G T A C T G T A G C A C G T A C G T A T C G A C T G
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

Myog/MA0500.1/Jaspar

Match Rank:7
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--GCAGCTGCTTGG
NNGCAGCTGTC---
 A C G T A C G T A C T G A G T C C T G A A C T G G T A C A C G T A C T G T A G C A C G T A C G T A T C G A C T G
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:8
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--GCAGCTGCTTGG
NNGCAGCTGTT---
 A C G T A C G T A C T G A G T C C T G A A C T G G T A C A C G T A C T G T A G C A C G T A C G T A T C G A C T G
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:GCAGCTGCTTGG
-CAGCTGNT---
 A C T G A G T C C T G A A C T G G T A C A C G T A C T G T A G C A C G T A C G T A T C G A C T G
A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:10
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:GCAGCTGCTTGG
-CAGCTGTT---
 A C T G A G T C C T G A A C T G G T A C A C G T A C T G T A G C A C G T A C G T A T C G A C T G
A C G T A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T