Information for 5-GGGGGCAGTA (Motif 3)

A C T G C T A G A C T G A C T G A C T G A G T C C G T A A C T G A G C T C G T A
Reverse Opposite:
A C G T C T G A A G T C A C G T A C T G A G T C A G T C G T A C A G T C A G T C
p-value:1e-945
log p-value:-2.177e+03
Information Content per bp:1.916
Number of Target Sequences with motif1518.0
Percentage of Target Sequences with motif10.33%
Number of Background Sequences with motif356.6
Percentage of Background Sequences with motif1.05%
Average Position of motif in Targets102.5 +/- 36.5bp
Average Position of motif in Background93.2 +/- 60.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RCS1/RCS1_H2O2Hi/35-RCS1(Harbison)/Yeast

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GGGGGCAGTA
GGGTGCANT-
 A C T G C T A G A C T G A C T G A C T G A G T C C G T A A C T G A G C T C G T A
C T A G A C T G A C T G A G C T C T A G G A T C C T G A C T A G G C A T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GGGGGCAGTA
TNNGGGCAG--
 A C G T A C T G C T A G A C T G A C T G A C T G A G T C C G T A A C T G A G C T C G T A
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:3
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----GGGGGCAGTA--
NNNAAGGGGGCGGGNNN
 A C G T A C G T A C G T A C G T A C G T A C T G C T A G A C T G A C T G A C T G A G T C C G T A A C T G A G C T C G T A A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

HIC2/MA0738.1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GGGGGCAGTA
NGTGGGCAT--
 A C G T A C T G C T A G A C T G A C T G A C T G A G T C C G T A A C T G A G C T C G T A
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T

PB0010.1_Egr1_1/Jaspar

Match Rank:5
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----GGGGGCAGTA
ANTGCGGGGGCGGN-
 A C G T A C G T A C G T A C G T A C G T A C T G C T A G A C T G A C T G A C T G A G T C C G T A A C T G A G C T C G T A
G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A A C G T

AFT1/MA0269.1/Jaspar

Match Rank:6
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------GGGGGCAGTA-----
CNANNCGGGTGCAATATNNNA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G A C T G A C T G A C T G A G T C C G T A A C T G A G C T C G T A A C G T A C G T A C G T A C G T A C G T
A T G C T G A C C G T A G C T A A C G T A T G C C T A G C A T G T C A G G A C T A T C G G A T C T C G A G T C A G C A T G T C A C A G T T A C G G A C T T C G A T G C A

RCS1(MacIsaac)/Yeast

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGGGGCAGTA
GGGTGCA---
 A C T G C T A G A C T G A C T G A C T G A G T C C G T A A C T G A G C T C G T A
T C A G C T A G A T C G A G C T C T A G A G T C T C G A A C G T A C G T A C G T

btd/MA0443.1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGGGGCAGTA
AGGGGGCGGA-
 A C G T A C T G C T A G A C T G A C T G A C T G A G T C C G T A A C T G A G C T C G T A
C T G A C T A G C A T G C T A G A C T G A C T G G T A C A C T G A C T G C T G A A C G T

btd/dmmpmm(Noyes)/fly

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GGGGGCAGTA
GGGGGCGGAT
 A C T G C T A G A C T G A C T G A C T G A G T C C G T A A C T G A G C T C G T A
C T A G C A T G C T A G A C T G A C T G T A G C A C T G A C T G C T G A C G A T

Hic1/MA0739.1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGGGGCAGTA
GGTTGGCAT--
 A C G T A C T G C T A G A C T G A C T G A C T G A G T C C G T A A C T G A G C T C G T A
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T