Information for 5-CCACACGA (Motif 4)

A G T C A G T C C G T A A G T C C T G A G T A C A C T G C T G A
Reverse Opposite:
A G C T A G T C A C T G A G C T A C T G A C G T A C T G A C T G
p-value:1e-326
log p-value:-7.528e+02
Information Content per bp:1.900
Number of Target Sequences with motif1678.0
Percentage of Target Sequences with motif11.42%
Number of Background Sequences with motif1315.6
Percentage of Background Sequences with motif3.88%
Average Position of motif in Targets99.6 +/- 42.4bp
Average Position of motif in Background102.3 +/- 59.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MET31(MacIsaac)/Yeast

Match Rank:1
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-CCACACGA
GCCACACC-
 A C G T A G T C A G T C C G T A A G T C C T G A G T A C A C T G C T G A
T C A G G T A C A G T C C T G A A G T C C G T A A T G C G A T C A C G T

MET32/MA0334.1/Jaspar

Match Rank:2
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--CCACACGA
CGCCACA---
 A C G T A C G T A G T C A G T C C G T A A G T C C T G A G T A C A C T G C T G A
G T A C C T A G A G T C A G T C G C T A A G T C T G C A A C G T A C G T A C G T

HNRNPL(RRM)/Homo_sapiens-RNCMPT00091-PBM/HughesRNA

Match Rank:3
Score:0.75
Offset:2
Orientation:forward strand
Alignment:CCACACGA-
--ACACAAN
 A G T C A G T C C G T A A G T C C T G A G T A C A C T G C T G A A C G T
A C G T A C G T C G T A A G T C C G T A G T A C T C G A T C G A T C G A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----CCACACGA
NWAACCACADNN
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C C T G A G T A C A C T G C T G A
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

CG7804(RRM)/Drosophila_melanogaster-RNCMPT00146-PBM/HughesRNA

Match Rank:5
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:CCACACGA
CCACACT-
 A G T C A G T C C G T A A G T C C T G A G T A C A C T G C T G A
A G T C G T A C C G T A A G T C G T C A G T A C C G A T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:6
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--CCACACGA
ATCCAC----
 A C G T A C G T A G T C A G T C C G T A A G T C C T G A G T A C A C T G C T G A
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T

At_0284(RRM)/Arabidopsis_thaliana-RNCMPT00284-PBM/HughesRNA

Match Rank:7
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CCACACGA
TCACACT-
 A G T C A G T C C G T A A G T C C T G A G T A C A C T G C T G A
G A C T A G T C C G T A G T A C C G T A A G T C G A C T A C G T

SUP-12(RRM)/Caenorhabditis_elegans-RNCMPT00179-PBM/HughesRNA

Match Rank:8
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CCACACGA
TCACACA-
 A G T C A G T C C G T A A G T C C T G A G T A C A C T G C T G A
G C A T A G T C C G T A A G T C C G T A A G T C C G T A A C G T

MET28/MA0332.1/Jaspar

Match Rank:9
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CCACACGA
CCACAG--
 A G T C A G T C C G T A A G T C C T G A G T A C A C T G C T G A
A G T C A G T C C G T A A G T C C G T A A C T G A C G T A C G T

MET28(MacIsaac)/Yeast

Match Rank:10
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CCACACGA
CCACAG--
 A G T C A G T C C G T A A G T C C T G A G T A C A C T G C T G A
A G T C A G T C C G T A A G T C C G T A A C T G A C G T A C G T