Information for 6-TGCAGTWCCN (Motif 6)

A G C T A C T G G A T C C G T A T C A G A G C T C G A T G A T C G T A C T G C A
Reverse Opposite:
A C G T C A T G C T A G G C T A C T G A A G T C A C G T C T A G G T A C T C G A
p-value:1e-229
log p-value:-5.291e+02
Information Content per bp:1.641
Number of Target Sequences with motif2830.0
Percentage of Target Sequences with motif19.26%
Number of Background Sequences with motif3487.4
Percentage of Background Sequences with motif10.29%
Average Position of motif in Targets99.7 +/- 46.1bp
Average Position of motif in Background99.6 +/- 60.3bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:1
Score:0.81
Offset:-3
Orientation:forward strand
Alignment:---TGCAGTWCCN
AGATGCAATCCC-
 A C G T A C G T A C G T A G C T A C T G G A T C C G T A T C A G A G C T C G A T G A T C G T A C T G C A
T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C A C G T

CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.76
Offset:0
Orientation:forward strand
Alignment:TGCAGTWCCN----------
TGCAGTTCCNNNNNTGGCCA
 A G C T A C T G G A T C C G T A T C A G A G C T C G A T G A T C G T A C T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T T A C G G A T C G C T A T C A G G A C T C G A T G T A C G A T C G T C A T C G A T G A C C G T A C T A G G A C T C T A G C T A G G T A C A G T C C G T A

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.75
Offset:-5
Orientation:reverse strand
Alignment:-----TGCAGTWCCN--
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T A C G T A C G T A G C T A C T G G A T C C G T A T C A G A G C T C G A T G A T C G T A C T G C A A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

Rbm42(RRM)/Xenopus_tropicalis-RNCMPT00282-PBM/HughesRNA

Match Rank:4
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TGCAGTWCCN
NGTAGTTG--
 A G C T A C T G G A T C C G T A T C A G A G C T C G A T G A T C G T A C T G C A
G A T C A C T G A C G T C G T A A C T G A C G T C G A T A T C G A C G T A C G T

PUM(PUF)/Drosophila_melanogaster-RNCMPT00105-PBM/HughesRNA

Match Rank:5
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TGCAGTWCCN
TGTAATT---
 A G C T A C T G G A T C C G T A T C A G A G C T C G A T G A T C G T A C T G C A
A C G T A C T G A C G T C G T A G C T A C G A T A C G T A C G T A C G T A C G T

CST6(MacIsaac)/Yeast

Match Rank:6
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TGCAGTWCCN
TGCATTTN--
 A G C T A C T G G A T C C G T A T C A G A G C T C G A T G A T C G T A C T G C A
A C G T A T C G G T A C C G T A A C G T G A C T A G C T G A T C A C G T A C G T

SOK2/MA0385.1/Jaspar

Match Rank:7
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TGCAGTWCCN
NNCCTGCAGGT---
 A C G T A C G T A C G T A C G T A G C T A C T G G A T C C G T A T C A G A G C T C G A T G A T C G T A C T G C A
A C G T A C T G A T G C G T A C A C G T C A T G A G T C G C T A A C T G T A C G A C G T A C G T A C G T A C G T

MAL13P1.35(RRM)/Plasmodium_falciparum-RNCMPT00234-PBM/HughesRNA

Match Rank:8
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TGCAGTWCCN
GTGTAAT----
 A C G T A G C T A C T G G A T C C G T A T C A G A G C T C G A T G A T C G T A C T G C A
A C T G A C G T A C T G A G C T C G T A G C T A A G C T A C G T A C G T A C G T A C G T

PHD1/MA0355.1/Jaspar

Match Rank:9
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TGCAGTWCCN
ACCTGCAGCA---
 A C G T A C G T A C G T A G C T A C T G G A T C C G T A T C A G A G C T C G A T G A T C G T A C T G C A
T G C A T A G C T G A C A G C T A C T G A G T C C T G A A C T G T A G C T G C A A C G T A C G T A C G T

Pp_0237(RRM)/Physcomitrella_patens-RNCMPT00237-PBM/HughesRNA

Match Rank:10
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TGCAGTWCCN
GATGGAGT----
 A C G T A C G T A G C T A C T G G A T C C G T A T C A G A G C T C G A T G A T C G T A C T G C A
A C T G C G T A A C G T A C T G A C T G C G T A C T A G A C G T A C G T A C G T A C G T A C G T