Information for 18-CTAAGCTGCGGY (Motif 18)

A G T C A C G T T G C A C G T A A C T G A G T C A C G T A T C G A G T C A C T G A C T G G A T C
Reverse Opposite:
C T A G A G T C A G T C A C T G A T G C C G T A A C T G A G T C A C G T A C G T C G T A A C T G
p-value:1e-28
log p-value:-6.609e+01
Information Content per bp:1.900
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif0.21%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets94.1 +/- 49.8bp
Average Position of motif in Background107.3 +/- 44.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CTAAGCTGCGGY
CGCAGCTGCG--
 A G T C A C G T T G C A C G T A A C T G A G T C A C G T A T C G A G T C A C T G A C T G G A T C
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T

MET32(MacIsaac)/Yeast

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CTAAGCTGCGGY
--AAACTGTGGC
 A G T C A C G T T G C A C G T A A C T G A G T C A C G T A T C G A G T C A C T G A C T G G A T C
A C G T A C G T G T C A C G T A C T G A A T G C A C G T A C T G A C G T A C T G A C T G A G T C

MET4/MA0335.1/Jaspar

Match Rank:3
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CTAAGCTGCGGY
---AACTGTGG-
 A G T C A C G T T G C A C G T A A C T G A G T C A C G T A T C G A G T C A C T G A C T G G A T C
A C G T A C G T A C G T C G T A T C G A A G T C A C G T A C T G A C G T A C T G A C T G A C G T

MET4(MacIsaac)/Yeast

Match Rank:4
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CTAAGCTGCGGY
---AACTGTGG-
 A G T C A C G T T G C A C G T A A C T G A G T C A C G T A T C G A G T C A C T G A C T G G A T C
A C G T A C G T A C G T C G T A T C G A A G T C A C G T A C T G A C G T A C T G A C T G A C G T

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CTAAGCTGCGGY
----GCTCCG--
 A G T C A C G T T G C A C G T A A C T G A G T C A C G T A T C G A G T C A C T G A C T G G A T C
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T

bcd-1/dmmpmm(Noyes)/fly

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTAAGCTGCGGY
CTAATCT-----
 A G T C A C G T T G C A C G T A A C T G A G T C A C G T A T C G A G T C A C T G A C T G G A T C
A G C T G C A T C G T A C G T A C A G T A G T C A G C T A C G T A C G T A C G T A C G T A C G T

bcd-1/dmmpmm(Noyes)/fly

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTAAGCTGCGGY
CTAATCT-----
 A G T C A C G T T G C A C G T A A C T G A G T C A C G T A T C G A G T C A C T G A C T G G A T C
A G C T G C A T C G T A C G T A C A G T A G T C A G C T A C G T A C G T A C G T A C G T A C G T

bcd/dmmpmm(Bigfoot)/fly

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTAAGCTGCGGY
CTAATCCN----
 A G T C A C G T T G C A C G T A A C T G A G T C A C G T A T C G A G T C A C T G A C T G G A T C
G A T C G C A T C G T A C G T A A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T

MET31/Literature(Harbison)/Yeast

Match Rank:9
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CTAAGCTGCGGY
--AAACTGTGG-
 A G T C A C G T T G C A C G T A A C T G A G T C A C G T A T C G A G T C A C T G A C T G G A T C
A C G T A C G T C G T A C G T A C G T A A G T C A C G T A C T G A C G T A C T G A C T G A C G T

MET32/Literature(Harbison)/Yeast

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CTAAGCTGCGGY
--AAACTGTGG-
 A G T C A C G T T G C A C G T A A C T G A G T C A C G T A T C G A G T C A C T G A C T G G A T C
A C G T A C G T C G T A C G T A C G T A A G T C A C G T A C T G A C G T A C T G A C T G A C G T