Information for 24-AGGCATGCTCCG (Motif 29)

C T G A C T A G A C T G T A G C C G T A C A G T A T C G A G T C A C G T A T G C G T A C T C A G
Reverse Opposite:
A G T C C A T G T A C G T G C A T C A G T A G C G T C A G C A T A T C G T A G C G A T C G A C T
p-value:1e-12
log p-value:-2.845e+01
Information Content per bp:1.523
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif0.07%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets101.8 +/- 52.8bp
Average Position of motif in Background143.1 +/- 37.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EIF-2ALPHA(S1)/Drosophila_melanogaster-RNCMPT00273-PBM/HughesRNA

Match Rank:1
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:AGGCATGCTCCG
--GCATGCT---
 C T G A C T A G A C T G T A G C C G T A C A G T A T C G A G T C A C G T A T G C G T A C T C A G
A C G T A C G T A C T G A G T C C G T A A C G T A C T G A G T C C G A T A C G T A C G T A C G T

GCR1/Literature(Harbison)/Yeast

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AGGCATGCTCCG
-GGCTTCCAC--
 C T G A C T A G A C T G T A G C C G T A C A G T A T C G A G T C A C G T A T G C G T A C T C A G
A C G T A C T G A C T G A G T C A C G T A C G T A G T C A G T C C G A T A G T C A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.65
Offset:6
Orientation:forward strand
Alignment:AGGCATGCTCCG
------GCTCCG
 C T G A C T A G A C T G T A G C C G T A C A G T A T C G A G T C A C G T A T G C G T A C T C A G
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

RBFOX1(RRM)/Homo_sapiens-RNCMPT00168-PBM/HughesRNA

Match Rank:4
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:AGGCATGCTCCG
--GCATGCA---
 C T G A C T A G A C T G T A G C C G T A C A G T A T C G A G T C A C G T A T G C G T A C T C A G
A C G T A C G T A C T G A G T C C G T A A C G T A C T G A G T C C G T A A C G T A C G T A C G T

RBFox2(?)/Heart-RBFox2-CLIP-Seq(GSE57926)/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AGGCATGCTCCG
-TGCATGCA---
 C T G A C T A G A C T G T A G C C G T A C A G T A T C G A G T C A C G T A T G C G T A C T C A G
A C G T C G A T C T A G G A T C G C T A A G C T C T A G G A T C C G T A A C G T A C G T A C G T

FUS3/MA0565.1/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AGGCATGCTCCG
-CGCATGCGC--
 C T G A C T A G A C T G T A G C C G T A C A G T A T C G A G T C A C G T A T G C G T A C T C A G
A C G T G A T C A T C G G T A C C G T A C A G T A C T G A T G C C T A G A T G C A C G T A C G T

LIN28A(CSD,Znf)/Homo_sapiens-RNCMPT00036-PBM/HughesRNA

Match Rank:7
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:AGGCATGCTCCG
-----TTCTCCN
 C T G A C T A G A C T G T A G C C G T A C A G T A T C G A G T C A C G T A T G C G T A C T C A G
A C G T A C G T A C G T A C G T A C G T A G C T C G A T A G T C A C G T A G T C A G T C C A T G

FOX-1(RRM)/Caenorhabditis_elegans-RNCMPT00017-PBM/HughesRNA

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AGGCATGCTCCG
--TCATGCA---
 C T G A C T A G A C T G T A G C C G T A C A G T A T C G A G T C A C G T A T G C G T A C T C A G
A C G T A C G T A C G T A G T C C G T A A C G T A C T G A G T C C G T A A C G T A C G T A C G T

MOT3/Literature(Harbison)/Yeast

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGGCATGCTCCG
NAGGCA-------
 A C G T C T G A C T A G A C T G T A G C C G T A C A G T A T C G A G T C A C G T A T G C G T A C T C A G
G A C T C G T A A C T G A C T G A G C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MOT3(MacIsaac)/Yeast

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGGCATGCTCCG
NAGGCA-------
 A C G T C T G A C T A G A C T G T A G C C G T A C A G T A T C G A G T C A C G T A T G C G T A C T C A G
G A C T C G T A A C T G A C T G A G C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T