Information for 14-AACAGCGS (Motif 8)

C G T A C G T A A G T C C G T A A T C G A G T C C T A G A T C G
Reverse Opposite:
T A G C A G T C A C T G A T G C C G A T C T A G C G A T C G A T
p-value:1e-65
log p-value:-1.516e+02
Information Content per bp:1.837
Number of Target Sequences with motif1033.0
Percentage of Target Sequences with motif6.23%
Number of Background Sequences with motif1132.5
Percentage of Background Sequences with motif3.51%
Average Position of motif in Targets97.5 +/- 55.6bp
Average Position of motif in Background101.3 +/- 59.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rhox11/MA0629.1/Jaspar

Match Rank:1
Score:0.81
Offset:-6
Orientation:reverse strand
Alignment:------AACAGCGS---
TCNNTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A A T C G A G T C C T A G A T C G A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:2
Score:0.81
Offset:-6
Orientation:reverse strand
Alignment:------AACAGCGS---
TCNNTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A A T C G A G T C C T A G A T C G A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

YBX2(CSD)/Homo_sapiens-RNCMPT00084-PBM/HughesRNA

Match Rank:3
Score:0.80
Offset:0
Orientation:forward strand
Alignment:AACAGCGS
AACAACN-
 C G T A C G T A A G T C C G T A A T C G A G T C C T A G A T C G
C T G A C T G A A T G C C G T A C G T A A G T C C G T A A C G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:4
Score:0.79
Offset:-6
Orientation:reverse strand
Alignment:------AACAGCGS---
TCNCTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A A T C G A G T C C T A G A T C G A C G T A C G T A C G T
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

STB5(MacIsaac)/Yeast

Match Rank:5
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---AACAGCGS
TATAACACCG-
 A C G T A C G T A C G T C G T A C G T A A G T C C G T A A T C G A G T C C T A G A T C G
G C A T C G T A G C A T C G T A C T G A T A G C G T C A T A G C G T A C T C A G A C G T

YBX1(CSD)/Homo_sapiens-RNCMPT00083-PBM/HughesRNA

Match Rank:6
Score:0.74
Offset:0
Orientation:forward strand
Alignment:AACAGCGS
AACATCA-
 C G T A C G T A A G T C C G T A A T C G A G T C C T A G A T C G
C G T A G T C A A G T C C G T A G A C T A G T C C G T A A C G T

YBX1(CSD)/Homo_sapiens-RNCMPT00116-PBM/HughesRNA

Match Rank:7
Score:0.74
Offset:0
Orientation:forward strand
Alignment:AACAGCGS
AACATCA-
 C G T A C G T A A G T C C G T A A T C G A G T C C T A G A T C G
C G T A G T C A A G T C C G T A A G C T A G T C C T G A A C G T

ara/MA0210.1/Jaspar

Match Rank:8
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-AACAGCGS
TAACA----
 A C G T C G T A C G T A A G T C C G T A A T C G A G T C C T A G A T C G
C G A T C G T A C G T A A G T C C G T A A C G T A C G T A C G T A C G T

caup/MA0217.1/Jaspar

Match Rank:9
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-AACAGCGS
TAACA----
 A C G T C G T A C G T A A G T C C G T A A T C G A G T C C T A G A T C G
C G A T C G T A C G T A A G T C C G T A A C G T A C G T A C G T A C G T

mirr/MA0233.1/Jaspar

Match Rank:10
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-AACAGCGS
AAACA----
 A C G T C G T A C G T A A G T C C G T A A T C G A G T C C T A G A T C G
C G T A C G T A C G T A A G T C C G T A A C G T A C G T A C G T A C G T